Gene SO_3900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3900 
Symbol 
ID1171540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4048804 
End bp4049379 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content45% 
IMG OID637345661 
Producthypothetical protein 
Protein accessionNP_719431 
Protein GI24375388 
COG category[R] General function prediction only 
COG ID[COG3150] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCTCT ATATTCACGG ATTCAACAGT TCTCCTTTCT CTGATAAAGC GGTGATAACG 
GCAAGATATA TGGCCGAGTA TCACCCATCT CTCACTTTTC ATCAGCCACA GTTACCCAAT 
ACACCCAAAG CAGCGATGGC TTTGCTGCAA AGCTATGTTG AGGCGGCGCA GCAAGCGAAC 
GAGCCCCTTA ATTATATTGG TTCGTCCTTG GGGGGCTACT TTGCCAGTTA TTTAGCTGAG 
CGTTATGGTG GCAGAGCTGT GTTGGTAAAC CCAGCCGTAA AGCCTTTTGA ATTGTTTGAT 
GAATTTATGG GGCCACAATT TAACCCTTAT ACCCAAGAGC ATTATCAGGT TTTACCAGAG 
CACAAGCGGG AAGTGGCTGA ATTTAATACT CCAGTTATCC GCAATCCGGA GCGTTTTTTG 
GTACTATTGC AAACGGGCGA TGAAGTGCTG GATTATCGTG AAGCACTGCA TAAGTATCAC 
CATTGTCAAT TACGGATAGA ATCCGGTGGT GATCACAGTT TTGTGGGTTA TGAGCGATAT 
CTGCAAACCG TAAGCCAATT TTTACACTTA CCTTGA
 
Protein sequence
MLLYIHGFNS SPFSDKAVIT ARYMAEYHPS LTFHQPQLPN TPKAAMALLQ SYVEAAQQAN 
EPLNYIGSSL GGYFASYLAE RYGGRAVLVN PAVKPFELFD EFMGPQFNPY TQEHYQVLPE 
HKREVAEFNT PVIRNPERFL VLLQTGDEVL DYREALHKYH HCQLRIESGG DHSFVGYERY 
LQTVSQFLHL P