Gene SO_3870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3870 
Symbol 
ID1171513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4016377 
End bp4017015 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content40% 
IMG OID637345634 
Productdisulfide bond formation protein 
Protein accessionNP_719402 
Protein GI24375359 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1495] Disulfide bond formation protein DsbB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATCA ATGAAGTTTT CCGAAGTTTC AAAGCTCAGC CGGTTAATCA ACTAGCTAAA 
ATTCAGGCTG AACGGCCAAT TTGGTTTGTG ATGGTAGGGG CTGCAATATT CCTCATTTTA 
TCAGCCATTT TTTATTTTCA ATTATTTTTA GCAATGGCTC CATGTGAAAA ATGTGTGTAC 
ATCCGTTTTA GTCAAAGTTG TATTGTAATC GCGGGTTTAA TTATTTTGAT TAATCCCAGA 
AATAATATTC TTAAGACTCT TGGCCTATTA TTAGCGTGGT ACGCTATGAT TCAGGGGTGG 
ATATGGTCCT TTGAATTGAT GAAAATTCAT GATGCCGCAC ATATGGTTGT TGACGAATCA 
ATGGATTTCT TTGCTGCTGC GGGTGATGCT GCTGGGTCTG CTTGTTCAAC AGAACCTCGT 
TTCCCACTAG GTTTGCCCTT AGATAAGTGG TTACCCTTTG AGTTTGCACC TACAGGTGGT 
TGTGGTGAAG ATGATTGGGC ATTATTTGGC TTAAACATGG CGCACTACTG TATGATTGCC 
TATGCGACAT TCATGGTTTG TTTAGCACCA CTCACCTTGG GTTGGTTCGC AAGTTTTATG 
ACAGATCGTC GAAATACTAT TGTATATCAG ACTCGATAA
 
Protein sequence
MSINEVFRSF KAQPVNQLAK IQAERPIWFV MVGAAIFLIL SAIFYFQLFL AMAPCEKCVY 
IRFSQSCIVI AGLIILINPR NNILKTLGLL LAWYAMIQGW IWSFELMKIH DAAHMVVDES 
MDFFAAAGDA AGSACSTEPR FPLGLPLDKW LPFEFAPTGG CGEDDWALFG LNMAHYCMIA 
YATFMVCLAP LTLGWFASFM TDRRNTIVYQ TR