| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3836 |
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| Symbol | ipk |
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| ID | 1171481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 3985657 |
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| End bp | 3986511 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637345603 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | NP_719369 |
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| Protein GI | 24375326 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCCAAG AGATTTCACG TAATTGGCCT GCGCCCGCCA AACTCAATCT GTTTTTGCAT
ATTAACGGAC GCCGTAGCGA TGGCTATCAT GAATTGCAAA CCCTGTTTCA GTTTGTTGAT
TGTTGCGATC AACTCGACTT TCGCGTAACT GATACGCCTG AACTCATTTT GCATTCGACG
ATGTCGGCGG TTGTCGCGGA TAGCGATAAC TTAATTCTGA GAGCCGCAAA ATCATTACAA
CAAGCCACTG GCTTTAACGG TGGCGCTGAA ATCTGGCTCG ATAAACGTCT GCCCATGGGC
GGCGGTTTGG GCGGTGGCTC ATCGGATGCG GCCACCACGC TCGTGGCCTT AAATCGGTTA
TGGAACACCC AATTATCCCA TGATGAACTA GCGGCGATTG GATTAAAACT CGGTGCCGAT
ATCCCTGTTT TTATTCATGG TTTCGCCGCA TTTGCACAGG GGGTGGGTGA GCGTTTACAG
GCGGTTAATC CGGCTGAATT ATGGTATTTA GTCATTGCGC CTGATGCCCA TGTTTCCACC
GCAGCCGTGT TCCAAGATCC ACTGCTCCCC CGTAATACAC CTAAGCTTGG CCTCGATACT
TTACTGAGCC AACCCTGGGC AAATGATTGC CAAGAACTGG TGGTTTCTAA ATACCCTCAA
GTTGCCAAGG CCTTAGGCTG GCTGCTAGAA TATGCGCCGT CGAGAATGAC CGGAACGGGC
GCATGCGTGT TTGGGGAGTT TTCGTCGCAG CAGCAAGCTC TCGCAGCCTT GGCGAAATTA
CCGTCTGATA TGCAAGGATT TGTTGCAAAA GGGATGAATA TTTCGCCGCT AATAGTGCGA
CTCAATCGTC CATAA
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| Protein sequence | MSQEISRNWP APAKLNLFLH INGRRSDGYH ELQTLFQFVD CCDQLDFRVT DTPELILHST
MSAVVADSDN LILRAAKSLQ QATGFNGGAE IWLDKRLPMG GGLGGGSSDA ATTLVALNRL
WNTQLSHDEL AAIGLKLGAD IPVFIHGFAA FAQGVGERLQ AVNPAELWYL VIAPDAHVST
AAVFQDPLLP RNTPKLGLDT LLSQPWANDC QELVVSKYPQ VAKALGWLLE YAPSRMTGTG
ACVFGEFSSQ QQALAALAKL PSDMQGFVAK GMNISPLIVR LNRP
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