| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3821 |
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| Symbol | |
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| ID | 1171466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3971030 |
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| End bp | 3972577 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637345590 |
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| Product | rtn protein |
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| Protein accession | NP_719356 |
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| Protein GI | 24375313 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAAC GCTTAAATAG CCTTTCGTCG CTTTTACGAT TATTTATTTC CCAATATGAT
CTTTCTCGCA AGCATTTATT CATCATGCTG TTTATGCCTA CCGTCTTGGC AATGGCATCA
AGTTATGTGA TAACAAATTA CTTGGTTGAT AAGAAGGCAC AAGAGGTTGG GGAGTTTAAT
CTCAAGCGGC TTGAGCATTT GTTAAGCGAG TCTGAGACGA TAGGGGAGTA TGCTACTACC
CTTAGTGAGG GCGACTGCGG CGCCCTGAAT GAATATATGC AGTTTAAGCC CTATTATCGC
GGTGTGTTAC TTTTTAACGC CCATGGTTTT CACTGTTCAT CTACAATGGG GGTGATTGAT
TATCCGCTTA ATTCACTCTT GCCCGAAGAT ACTCTCAAAA AACCGGCTTA TTTTATTGTT
CCTGAAACAC CTGCGCGCTC AGGTGTTCCT GCCATTTTAG TTATCTCTAC TCAGGCTAAT
TTAACGCGTG GTGCAGTAGT TATCATTGAA GGGCAATATT TAATCGACAG TTTTATTCAA
CCTGAGGTAT TTCCTCGTCC TGTTAGCCAT GTGGTGTTGG GATTAAAGGG GGCGACCTTA
CCTACTGTCC CACAATTTGG TGATGGGAAA GTGGTTGCAG TAAAAGCTGA GCACTCCGAG
GTGGTGATCC TGCTTGAGGT TTCACAGGCG TTTTTTTGGC ATTTTTTCTG GATATGTTTT
GGCATACTAC TGCCGTTTTT ACTGGCTTTT GTTTGGTTGG TCGGTCTACA TCTTTGGCGT
AAAAAAAGCC GGTCTTCATT AGCCGATGAC ATTAAAAGCG GTATCGAGAA TCAAGAGTTT
TTTTTGGTAT ATCAACCTAT TGTTAGTAGT GATGATGGTA AGGCTAAAGG CGTTGAAGCA
TTAGTGCGTT GGCAGCATCC CCAAATGGGC TTAGTGCGCC CCGATTTATT TATACCCATT
GCCGAACAGA GCCAATTAAT CGTCCCGTTA ACCAATTATA TTTTTGAACG AGCCTTGGCC
GATTTTAGCA AATTGTCCGT GGATTCGGGG TTTAGGATTG GTTTTAACGT AGCACCAGAG
CATTTTATTC AAAGTGATAT AGAGGCTAAA TTTCGCTATC TAAAAGATGC TTTTGCGCGT
ATTGGCGTGC AACCTTTAAT TGAAATCACC GAGCGGCAGT TATTAACCGC GGATATGTGT
GAACGAATTA CGGCATTGCG TGAGCTTGAT ATTTTAGTGG CGATTGATGA TTTTGGTACA
GGGCAGACGA CCTTGTCGCT GCTGCAAACC TTCACCTTAG ACTATCTTAA AATTGATAAA
TGTTTTATCG ATACCATAGG CCAAGATTCG GTCACTTCCC ATGTGTTGGA TACCATTATC
GAGCTCTGCC ATAAAATGAA TTATGTAGCG GTGGCAGAAG GTGTTGAAAC CCAACAACAA
GCAGATTATT TAATCAGTCG TGATGTGCAT TTTTTGCAAG GATATTTATT TGCTAAACCG
ATGAAATTAG ATGAACTTTC CCATTGGCTT GAGGCGCATA GCGAATAA
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| Protein sequence | MPKRLNSLSS LLRLFISQYD LSRKHLFIML FMPTVLAMAS SYVITNYLVD KKAQEVGEFN
LKRLEHLLSE SETIGEYATT LSEGDCGALN EYMQFKPYYR GVLLFNAHGF HCSSTMGVID
YPLNSLLPED TLKKPAYFIV PETPARSGVP AILVISTQAN LTRGAVVIIE GQYLIDSFIQ
PEVFPRPVSH VVLGLKGATL PTVPQFGDGK VVAVKAEHSE VVILLEVSQA FFWHFFWICF
GILLPFLLAF VWLVGLHLWR KKSRSSLADD IKSGIENQEF FLVYQPIVSS DDGKAKGVEA
LVRWQHPQMG LVRPDLFIPI AEQSQLIVPL TNYIFERALA DFSKLSVDSG FRIGFNVAPE
HFIQSDIEAK FRYLKDAFAR IGVQPLIEIT ERQLLTADMC ERITALRELD ILVAIDDFGT
GQTTLSLLQT FTLDYLKIDK CFIDTIGQDS VTSHVLDTII ELCHKMNYVA VAEGVETQQQ
ADYLISRDVH FLQGYLFAKP MKLDELSHWL EAHSE
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