| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3783 |
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| Symbol | |
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| ID | 1171430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 3935464 |
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| End bp | 3937071 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637345556 |
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| Product | DEAD-box ATP dependent DNA helicase |
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| Protein accession | NP_719320 |
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| Protein GI | 24375277 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTT CCGCCTTAGG TTTATCCGCA CCACTTCAAA AAGCTGTGTC CGAACAGGGC
TATGACACGC CATCTCCAAT CCAAGCTCAG GCTATTCCAG CTGTGCTAAC GGGCAAAGAC
GTCATGGCAG CGGCCCAAAC TGGGACAGGA AAAACTGCAG GTTTTACGCT GCCATTACTG
GAATTACTCG CTAAAGGCCA CAAAGCCAAG TCAGGACAAA CCCGCGCCTT AGTCTTAACA
CCTACGAGGG AACTGGCGGC ACAAGTTGGC GAAAGTGTTG AAACCTATGG TAAATATCTA
CCGCTGCGTT CCGCTGTAGT ATTTGGTGGT GTACCCATCA ACCCACAAAT CAATAAATTA
CGCCATGGTG TTGATGTGCT AGTTGCCACA CCTGGGCGAC TATTAGATCT TGTGCAGCAA
AATGCGGTGA AGTTTAATCA ACTCGAAATC TTAGTGCTCG ACGAAGCGGA CCGTATGTTG
GATATGGGCT TTATCCGCGA TATCAAAAAG ATCCTTGCAC TCTTGCCCGC AAAGCGACAA
AACCTGATGT TTTCTGCCAC CTTCTCCGAT GAGATCCGTG AGCTTGCAAA AGGATTAGTT
AATCATCCGG TTGAGATTTC CGTCACGCCG CGCAATGCAG CTGCAACCAC GGTTAAGCAA
TGGATTTGTC CCGTCGATAA AACGCAAAAA TCAGCCTTGC TGATCCAACT CATCAAGCAG
GAAAACTGGC AGCAAGTGTT AGTGTTTTCA CGCACCAAAC ATGGCGCGAA TCGGCTCGCT
AAGAGCCTTA TCCAAGCCGA GATCAGTGCT GCTGCAATCC ACGGTAATAA AAGCCAAGGT
GCCCGTACTA AAGCCCTCGC CGACTTTAAA AGCGGTGAAG TTCGCGTATT GGTTGCGACC
GATATTGCCG CTCGCGGTTT AGATATCGAT CAATTACCAC AGGTCGTAAA CTTCGATTTA
CCTAACGTGC CTGAAGATTA TGTGCATCGC ATTGGCCGTA CAGGGCGTGC TGGCGCCACA
GGCCAAGCCG TTTCCTTAGT CAGCAGCGAA GAAATTAAAC TGCTTAAAGA TATTGAGCGA
TTAATTAATC GCGTGCTCGA GCGCCAAGAA GTTGAAGGTT TTAGCCCTGT ACATGCATTG
CCAGAGACAA CACTCAATCC CCAAGGCAAA GATACCAAAG TTAAAGCCGT GGCAAATCAT
CGTAAGCACC GCAGCGCAGG AAAACCTGCA CCACGGTCTG GTTCTGGCCG TGATACGCAA
GGCAATCGAG AAAACAGCCA GAGGCAGAAC AGCGCATCAT CTCGCAACAG CAATGAACAT
AATAATACCG AGGCAGCAGT TGCGCGCTCG CCAAAACCAA AAAGTAAGCA TCCTCAGCGC
GATGGCGGCA CCGCTAACAG TGCAACGGCG GGGAACAATG CTAAAGCGAA ACCGCATTCA
GGTGCACAGC AACGTAGCCA TGCAGAACGA AGCGAAAAAT CAAACAATGA TGGACGCCGC
CAAGAGCAAC CCAAAGGCCG CAATCCGCAA AGTGCAAAAC CTGCTTCGAA TCAGCCGAAA
CAGCACTCAC ATCGCGCCGA TAACCGCCCG AATAGTGTCA AGCCTTAA
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| Protein sequence | MSFSALGLSA PLQKAVSEQG YDTPSPIQAQ AIPAVLTGKD VMAAAQTGTG KTAGFTLPLL
ELLAKGHKAK SGQTRALVLT PTRELAAQVG ESVETYGKYL PLRSAVVFGG VPINPQINKL
RHGVDVLVAT PGRLLDLVQQ NAVKFNQLEI LVLDEADRML DMGFIRDIKK ILALLPAKRQ
NLMFSATFSD EIRELAKGLV NHPVEISVTP RNAAATTVKQ WICPVDKTQK SALLIQLIKQ
ENWQQVLVFS RTKHGANRLA KSLIQAEISA AAIHGNKSQG ARTKALADFK SGEVRVLVAT
DIAARGLDID QLPQVVNFDL PNVPEDYVHR IGRTGRAGAT GQAVSLVSSE EIKLLKDIER
LINRVLERQE VEGFSPVHAL PETTLNPQGK DTKVKAVANH RKHRSAGKPA PRSGSGRDTQ
GNRENSQRQN SASSRNSNEH NNTEAAVARS PKPKSKHPQR DGGTANSATA GNNAKAKPHS
GAQQRSHAER SEKSNNDGRR QEQPKGRNPQ SAKPASNQPK QHSHRADNRP NSVKP
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