Gene SO_3781 details

Gene Information

• Locus tag: SO_3781
• ID: 1171428
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 3933405
• End bp: 3933923
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637345554
• Product: hypothetical protein
• Protein accession: NP_719318
• Protein GI: 24375275
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAAATA AAAATGCGGG TTTTACCTTA ATTGAACTTG TTGTGGTAAT TATTATTTTA 
GGGATTTTAG CTGTCGTTGC TGCACCCAAA TTTATTAATT TACAATCAGA TGCCTATAAA 
AGTCAGTTAT CAGGCGCCTT TGCCTCAATG AAATCTGCGG TCACCTTATT CAAAGCAAAA 
TCAGAAATCG CCAATACGGG CCCCTCAAAT CGTGTGGTTT TTGATGGTAT TCGGGGGGAG 
AATTACCAGC CATGGGCCGC GAGCAGTAAC GGTACTTTGC CAAGTGCCGG TTACACAACA 
CCCCCTGAAA TTTTTAATGC CGCTGGGCTT AATGTTAACG ACTGGGCCTA CCGTATCTAC 
ACTTCAAGCG GTACTTATGA AGTCATTGCA ACCCCCAAGA AAAAATTAAA TCTTGCTACG 
CCCACGCAAG CCGAAGTTGC TGCAACCAAC TGTTATATTG ATTATAAATG GGAAACGGCT 
GGCGTACCTA CCTATACAAA GGTTGATACA GGCTGCTAA 

 

Protein sequence

MTNKNAGFTL IELVVVIIIL GILAVVAAPK FINLQSDAYK SQLSGAFASM KSAVTLFKAK 
SEIANTGPSN RVVFDGIRGE NYQPWAASSN GTLPSAGYTT PPEIFNAAGL NVNDWAYRIY 
TSSGTYEVIA TPKKKLNLAT PTQAEVAATN CYIDYKWETA GVPTYTKVDT GC