| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3748 |
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| Symbol | |
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| ID | 1171397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 3895207 |
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| End bp | 3896121 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637345524 |
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| Product | LysM domain-containing protein |
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| Protein accession | NP_719287 |
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| Protein GI | 24375244 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTATGC TCCGCACCAC AGCTTTATTA TTGACTTTGG TTTTCCCAAG TCTCTCCGCT
TTAGCAACGG AATACCCTTT ACCGTCTCCG AAGAGTCGGT TAGTTGGCGA GAACCTGTAT
TACACAGTGC CAGAGGGTAA ACATACCCTC GAAGATATTG CTGCTCAGTT CCAACTCGGT
CTAAGCAACT TGCTGGAAGC CAATCCAGGC GTCGATCCGT TTCTACCTAA GCCTGGCAGT
AAGCTATTAA TTCCAAAACA ATTAATCCTA CCAAATGCAC CTCGCGAAGG CATAGTGATC
AACGTTGCCG AAATGCGTCT GTATTACTAT CCAAAGGGAA AAAAGACGGT TGAAGTGCTA
CCCATTGGTA TTGGCCAAAT CGGTAAAGAT ACGCCAGAAA ACTGGGTAAC CAGCGTTCAA
CGTAAGCGTG CAAACCCCAC TTGGACTCCT ACACCACGTA TTCGCAAAGA ATATGCGGCA
AGGGGAGAAA TTCTACCTGC GGTATGGCCA GCAGGTCCTG ATAACCCAAT GGGACTCTAT
GCACTCTACA TTGGTAACTT GTATGCCATC CATGGCACCA ATGCCAGCTT CGGTATTGGT
TTACGAGTAA GCCAAGGCTG TGTCCGTTTA CGTCACGATG ATATTGAACA CTTGTTCAAA
ACTGTGCCTA TAGGGACCCG AGTACAATTT GTAAACCAAC CGATTAAGGC GACCGAAGAG
CCAGATGGCA AGCGTTACCT AGCCGTACAT CAGCCGCTAT CACGCACCAT TGCTGAGTTT
GAGTCTAATG AGCCAGTTGC ACTTTCTTTA CCGAAAGATA TCGCAAAGTT TATTGCAAAA
GCTGACACCG ACTCCAGCAT GATTAAAAAG CTACTGGATG AGCGCACTGG CGTACCAGCG
ATTATTAATC AGTAA
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| Protein sequence | MSMLRTTALL LTLVFPSLSA LATEYPLPSP KSRLVGENLY YTVPEGKHTL EDIAAQFQLG
LSNLLEANPG VDPFLPKPGS KLLIPKQLIL PNAPREGIVI NVAEMRLYYY PKGKKTVEVL
PIGIGQIGKD TPENWVTSVQ RKRANPTWTP TPRIRKEYAA RGEILPAVWP AGPDNPMGLY
ALYIGNLYAI HGTNASFGIG LRVSQGCVRL RHDDIEHLFK TVPIGTRVQF VNQPIKATEE
PDGKRYLAVH QPLSRTIAEF ESNEPVALSL PKDIAKFIAK ADTDSSMIKK LLDERTGVPA
IINQ
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