Gene SO_3747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3747 
Symbol 
ID1171396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3892711 
End bp3894435 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content48% 
IMG OID637345523 
Productpotassium/proton antiporter 
Protein accessionNP_719286 
Protein GI24375243 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATGCAG ATTCCATCAA TAGTTTTTTT CTGATCGGTG CCTTACTTAC TGCTGTGAGT 
GTTTTATTAA GTCCTATGTC ATCCCGTCTT GGGATTCCTA TCTTATTAAT TTTCCTCGCG
GTAGGTATTC TTGCTGGTGA AGATGGTCCC GGCGGAATTC TGTTTGATGA CTACTCAACC
GCGTATCTTG TTAGTAACTT TGCCTTAGCC ATTATCTTGC TCGATGGCGG TATGCGCACG
CGGGTCGCCA GTTTTAGAGT GGCCTTGTGG CCAGCCTTGT CATTGGCAAC CTTTGGGGTG
GCGATCACTA CCAGTATTAC CGGGGTTATG GCGGCGTGGT TATTTGACCT TCATTGGCTA
CAAGGCTTGC TCGTGGGGGC CATTGTGGGT TCGACTGATG CGGCAGCGGT ATTCTCGCTA
TTAAAGGGGC GCAGCCTTAA CGAGCGGGTT GGTGCAACGC TGGAAATCGA ATCGGGTAGT
AACGATCCTA TGGCAGTGTT TTTAACCGTC ACTTTAATTG CCATCCTTGC CAATGTCGGT
GCTGAGTTAT CCGCCAGTTT TATGTTGATT AGCTTTATTA AGCAGTTTGG TTTGGGGGTT
TTATTAGGTC TAGGTGGTGG CTGGCTGCTT TGGAAATTGG TGAATGTAAG CAAGCTTGCA
GAAGGTTTAT ATTCGATTCT CGTGCTTAGT GGTGGTCTAA TGATCTATGC CACTTCGAAT
AAGTTAGGCG GTAGTGGCAT TCTGTCGATT TACTTAGTTG GACTTTTTCT TGGCAATAAA
CCTACCCGTG GACGCCATGC GATATTAAAC GTGTTGGATG GCATGACTTG GGTTAGTCAA
ATCGGTATGT TCCTCGTATT AGGGTTGTTA CTGACACCGT CGGATTTATT GGATATTTGG
CTACCAGGTT TAGCTTTGGC CTTTGGGATG ATTCTGTTTG CTAGACCACT GGCGGTATGG
TTAAGCTTAT TACCCTTTAA GAGTTTTGGT AGCCGTGATC GCTGGTTTAT CTCTTGGGTA
GGACTTCGTG GGGCTGTGCC GATTATTTTA GCGGTATTCC CTATGATGGC AGGGCTTCCT
GGGGCTCAGC TGTACTTTAA CTTAGCCTTT TTCGTGGTGA TCGTTTCACT CTTAGTGCAG
GGGGCATCAC TCACTACAGC CGCGCGGTTA GCTAAGGTGG AACTGCCCCC AAAGCCGTTA
CCTATTTCGC GTTCGGGAGT TGAAATTTAC CCAAAAAGCG AATGGGAAGT TTTTGTCTAC
TGTTTGAGTG AAAGTAAGTG GTGTATAGGT GAACCGCTAA AACGCTTAGC GATGCCTGAT
GGAACTCGAA TTGCGGCGGT ATTTCGCAAT AATACGCTAT TACACCCCTC GGGCAGTACG
TGCTTAGAAG CGGGTGATAT TCTGTGTGTA CTCGGTCAGG AAAAGAGCCT AGAGGCATTA
AGTAACCTCT TTAGCCAAGC CCCTGAAACG GATGAAGTAT CGCGATTCTT TGGCGACTTC
TTTATCGATA CCGAAGTCAA ACTGGCTGAT CTTGCGCCTA TCTATGGCTT AACCTTAGAT
GATGAAACGG GTGCCATGAC AGTGGCTGAT TTAGTCGCGT TAGAGCTTGG GGCACACCCT
GTACTCGGGG ACCAGTTCCT GTGGCAGTCA CTCCATTGGG TGGTCGCTGG GCTCTATGAA
GGCAAAGTCA CCAATGTGGG GATTCGCTTA CCCGCGGATG CTTAA
 
Protein sequence
MDADSINSFF LIGALLTAVS VLLSPMSSRL GIPILLIFLA VGILAGEDGP GGILFDDYST 
AYLVSNFALA IILLDGGMRT RVASFRVALW PALSLATFGV AITTSITGVM AAWLFDLHWL
QGLLVGAIVG STDAAAVFSL LKGRSLNERV GATLEIESGS NDPMAVFLTV TLIAILANVG
AELSASFMLI SFIKQFGLGV LLGLGGGWLL WKLVNVSKLA EGLYSILVLS GGLMIYATSN
KLGGSGILSI YLVGLFLGNK PTRGRHAILN VLDGMTWVSQ IGMFLVLGLL LTPSDLLDIW
LPGLALAFGM ILFARPLAVW LSLLPFKSFG SRDRWFISWV GLRGAVPIIL AVFPMMAGLP
GAQLYFNLAF FVVIVSLLVQ GASLTTAARL AKVELPPKPL PISRSGVEIY PKSEWEVFVY
CLSESKWCIG EPLKRLAMPD GTRIAAVFRN NTLLHPSGST CLEAGDILCV LGQEKSLEAL
SNLFSQAPET DEVSRFFGDF FIDTEVKLAD LAPIYGLTLD DETGAMTVAD LVALELGAHP
VLGDQFLWQS LHWVVAGLYE GKVTNVGIRL PADA