Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3747 |
Symbol | |
ID | 1171396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3892711 |
End bp | 3894435 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637345523 |
Product | potassium/proton antiporter |
Protein accession | NP_719286 |
Protein GI | 24375243 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATGCAG ATTCCATCAA TAGTTTTTTT CTGATCGGTG CCTTACTTAC TGCTGTGAGT GTTTTATTAA GTCCTATGTC ATCCCGTCTT GGGATTCCTA TCTTATTAAT TTTCCTCGCG GTAGGTATTC TTGCTGGTGA AGATGGTCCC GGCGGAATTC TGTTTGATGA CTACTCAACC GCGTATCTTG TTAGTAACTT TGCCTTAGCC ATTATCTTGC TCGATGGCGG TATGCGCACG CGGGTCGCCA GTTTTAGAGT GGCCTTGTGG CCAGCCTTGT CATTGGCAAC CTTTGGGGTG GCGATCACTA CCAGTATTAC CGGGGTTATG GCGGCGTGGT TATTTGACCT TCATTGGCTA CAAGGCTTGC TCGTGGGGGC CATTGTGGGT TCGACTGATG CGGCAGCGGT ATTCTCGCTA TTAAAGGGGC GCAGCCTTAA CGAGCGGGTT GGTGCAACGC TGGAAATCGA ATCGGGTAGT AACGATCCTA TGGCAGTGTT TTTAACCGTC ACTTTAATTG CCATCCTTGC CAATGTCGGT GCTGAGTTAT CCGCCAGTTT TATGTTGATT AGCTTTATTA AGCAGTTTGG TTTGGGGGTT TTATTAGGTC TAGGTGGTGG CTGGCTGCTT TGGAAATTGG TGAATGTAAG CAAGCTTGCA GAAGGTTTAT ATTCGATTCT CGTGCTTAGT GGTGGTCTAA TGATCTATGC CACTTCGAAT AAGTTAGGCG GTAGTGGCAT TCTGTCGATT TACTTAGTTG GACTTTTTCT TGGCAATAAA CCTACCCGTG GACGCCATGC GATATTAAAC GTGTTGGATG GCATGACTTG GGTTAGTCAA ATCGGTATGT TCCTCGTATT AGGGTTGTTA CTGACACCGT CGGATTTATT GGATATTTGG CTACCAGGTT TAGCTTTGGC CTTTGGGATG ATTCTGTTTG CTAGACCACT GGCGGTATGG TTAAGCTTAT TACCCTTTAA GAGTTTTGGT AGCCGTGATC GCTGGTTTAT CTCTTGGGTA GGACTTCGTG GGGCTGTGCC GATTATTTTA GCGGTATTCC CTATGATGGC AGGGCTTCCT GGGGCTCAGC TGTACTTTAA CTTAGCCTTT TTCGTGGTGA TCGTTTCACT CTTAGTGCAG GGGGCATCAC TCACTACAGC CGCGCGGTTA GCTAAGGTGG AACTGCCCCC AAAGCCGTTA CCTATTTCGC GTTCGGGAGT TGAAATTTAC CCAAAAAGCG AATGGGAAGT TTTTGTCTAC TGTTTGAGTG AAAGTAAGTG GTGTATAGGT GAACCGCTAA AACGCTTAGC GATGCCTGAT GGAACTCGAA TTGCGGCGGT ATTTCGCAAT AATACGCTAT TACACCCCTC GGGCAGTACG TGCTTAGAAG CGGGTGATAT TCTGTGTGTA CTCGGTCAGG AAAAGAGCCT AGAGGCATTA AGTAACCTCT TTAGCCAAGC CCCTGAAACG GATGAAGTAT CGCGATTCTT TGGCGACTTC TTTATCGATA CCGAAGTCAA ACTGGCTGAT CTTGCGCCTA TCTATGGCTT AACCTTAGAT GATGAAACGG GTGCCATGAC AGTGGCTGAT TTAGTCGCGT TAGAGCTTGG GGCACACCCT GTACTCGGGG ACCAGTTCCT GTGGCAGTCA CTCCATTGGG TGGTCGCTGG GCTCTATGAA GGCAAAGTCA CCAATGTGGG GATTCGCTTA CCCGCGGATG CTTAA
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Protein sequence | MDADSINSFF LIGALLTAVS VLLSPMSSRL GIPILLIFLA VGILAGEDGP GGILFDDYST AYLVSNFALA IILLDGGMRT RVASFRVALW PALSLATFGV AITTSITGVM AAWLFDLHWL QGLLVGAIVG STDAAAVFSL LKGRSLNERV GATLEIESGS NDPMAVFLTV TLIAILANVG AELSASFMLI SFIKQFGLGV LLGLGGGWLL WKLVNVSKLA EGLYSILVLS GGLMIYATSN KLGGSGILSI YLVGLFLGNK PTRGRHAILN VLDGMTWVSQ IGMFLVLGLL LTPSDLLDIW LPGLALAFGM ILFARPLAVW LSLLPFKSFG SRDRWFISWV GLRGAVPIIL AVFPMMAGLP GAQLYFNLAF FVVIVSLLVQ GASLTTAARL AKVELPPKPL PISRSGVEIY PKSEWEVFVY CLSESKWCIG EPLKRLAMPD GTRIAAVFRN NTLLHPSGST CLEAGDILCV LGQEKSLEAL SNLFSQAPET DEVSRFFGDF FIDTEVKLAD LAPIYGLTLD DETGAMTVAD LVALELGAHP VLGDQFLWQS LHWVVAGLYE GKVTNVGIRL PADA
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