Gene SO_3692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3692 
Symbol 
ID1171348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3843142 
End bp3843882 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content50% 
IMG OID637345476 
ProductABC transporter, ATP-binding protein 
Protein accessionNP_719232 
Protein GI24375189 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATCAA TGAAGAATAT CAGTAAGGTT TTTAAAACGG ACTTAGTGGA AACCCATGCG 
CTGCGGGATT TTAATCTTGA GGTGAGCGAG GGCGAGTTTG TGGCGGTGAC AGGGCCCTCT
GGATCGGGCA AAACCACCTT TCTAAATATT GCAGGCTTAC TCGAAGGCTT TACCCATGGG
GATTACTTTT TAGATGGCAT CAATGTCTCA AACCTCAGTG ATAACAAAAG CGCCGCCGTA
CGTAATGAGA AAATTGGCTT TATTTTCCAA GGTTTTAACC TGATCCCCGA TCTTAATTTA
GCCGAAAACA TTGAAGTGCC ACTGCGTTAC CGTGGCTTTA GCGCCAAAGA GCGTAACCGC
CGCGTGGAAC AGGCGCTGGA GCAAGTCGGT TTAGCTGCCC GCATGAAGCA TTTACCTACC
CAATTATCTG GCGGTCAGCA ACAAAGGGTG GCGATTGCCC GTGCACTTGC GGGTGAGCCA
CGGTTTTTAC TCGCCGACGA ACCAACCGGT AACCTCGACA GTTTAATGGC ACGTCAAGTG
ATGGAATTAC TTGAAAATAT TAATCAGGCA GGCACCACTA TTATCATGGT AACCCATGAC
CCTGAACTGG CGCGCCGCGC CCAGCGCAAT ATTCAAATCG TCGATGGTCA AGTCTGCGAC
TTTACCATGT ATCAACCCAA TGTGGCCCGC AGCGCAAGCC TCGGCAGCGT CGATAAACTG
GTTGCTAACG CCCAAGGCTA G
 
Protein sequence
MLSMKNISKV FKTDLVETHA LRDFNLEVSE GEFVAVTGPS GSGKTTFLNI AGLLEGFTHG 
DYFLDGINVS NLSDNKSAAV RNEKIGFIFQ GFNLIPDLNL AENIEVPLRY RGFSAKERNR
RVEQALEQVG LAARMKHLPT QLSGGQQQRV AIARALAGEP RFLLADEPTG NLDSLMARQV
MELLENINQA GTTIIMVTHD PELARRAQRN IQIVDGQVCD FTMYQPNVAR SASLGSVDKL
VANAQG