Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3692 |
Symbol | |
ID | 1171348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3843142 |
End bp | 3843882 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637345476 |
Product | ABC transporter, ATP-binding protein |
Protein accession | NP_719232 |
Protein GI | 24375189 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTATCAA TGAAGAATAT CAGTAAGGTT TTTAAAACGG ACTTAGTGGA AACCCATGCG CTGCGGGATT TTAATCTTGA GGTGAGCGAG GGCGAGTTTG TGGCGGTGAC AGGGCCCTCT GGATCGGGCA AAACCACCTT TCTAAATATT GCAGGCTTAC TCGAAGGCTT TACCCATGGG GATTACTTTT TAGATGGCAT CAATGTCTCA AACCTCAGTG ATAACAAAAG CGCCGCCGTA CGTAATGAGA AAATTGGCTT TATTTTCCAA GGTTTTAACC TGATCCCCGA TCTTAATTTA GCCGAAAACA TTGAAGTGCC ACTGCGTTAC CGTGGCTTTA GCGCCAAAGA GCGTAACCGC CGCGTGGAAC AGGCGCTGGA GCAAGTCGGT TTAGCTGCCC GCATGAAGCA TTTACCTACC CAATTATCTG GCGGTCAGCA ACAAAGGGTG GCGATTGCCC GTGCACTTGC GGGTGAGCCA CGGTTTTTAC TCGCCGACGA ACCAACCGGT AACCTCGACA GTTTAATGGC ACGTCAAGTG ATGGAATTAC TTGAAAATAT TAATCAGGCA GGCACCACTA TTATCATGGT AACCCATGAC CCTGAACTGG CGCGCCGCGC CCAGCGCAAT ATTCAAATCG TCGATGGTCA AGTCTGCGAC TTTACCATGT ATCAACCCAA TGTGGCCCGC AGCGCAAGCC TCGGCAGCGT CGATAAACTG GTTGCTAACG CCCAAGGCTA G
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Protein sequence | MLSMKNISKV FKTDLVETHA LRDFNLEVSE GEFVAVTGPS GSGKTTFLNI AGLLEGFTHG DYFLDGINVS NLSDNKSAAV RNEKIGFIFQ GFNLIPDLNL AENIEVPLRY RGFSAKERNR RVEQALEQVG LAARMKHLPT QLSGGQQQRV AIARALAGEP RFLLADEPTG NLDSLMARQV MELLENINQA GTTIIMVTHD PELARRAQRN IQIVDGQVCD FTMYQPNVAR SASLGSVDKL VANAQG
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