| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3664 |
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| Symbol | fadD-2 |
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| ID | 1171321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 3816560 |
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| End bp | 3818158 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637345450 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | NP_719205 |
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| Protein GI | 24375162 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATACG ATCAAGAGTC ACAACTCGAA CTTGGCAAGT ACTCATCACT CATAGACTTA
ATCGAACGCA CTAGCCAACG CTTTGGCGAT AAAACGGCAT ATGCTTGTTT GGGGAAAAAT
AGCAGTTTCA ATGAGATAGA ACGCGACTCA CGTTATTTTG CTGCCTATCT GCAAAATAAC
ACTAACTTAA AACCTGGTGA TCGCATCGCG ATCCAGTTAC CCAATATCAC CCAATTTGTC
ATCGCTGCCT ATGGGGCGCT GCGAGCGGGC CTTATCCTTG TCAACACCAA CCCGCTGTAT
ACCGAACGTG AGCTCATTCA CCAGTTTAAT GATTCGGGTG CTAAGGCATT GGTGGTGTTA
TCGGACTTAC TGCCAACATT GGCCAAAGTC GTTGCAACCA CCCCCATTGA ACTGGTTATT
TCGACTCATC CGTTAGATCT TATCGACCCA CAAGTTCAGC CCAAGACAGG GCTTAAAAAT
GTTGAATTCT GTCATGTATT ACAACAAGGT GCGCTGTTAC CCTTTACTCG CTTTGTACCA
ACATTGAGCG ATCTGGCGGC ACTGCAATAT ACAGGTGGAA CAACGGGACT TTCTAAGGGT
GCAATGCTGA CCCACGGCAA TATGCTTGCC AATGCGGCGC AGGTAAAATC CCGTATTGGT
AGCGTGATCA GCGAAGGCGA AGACATTTTT GTCGCGCCAT TGCCGATTTA CCATATTTAC
GCCTTTATGG TGAACTTGGT GCTTTATTTT GAATGCGGTG GATGCTCAGT ACTAATCCCT
AATCCCCGTG ATATTAATGG CTTAATCAAA ACGCTGGCGA AATATCCTTT CACCGGTTTT
GCGGGACTTA ACACTCTATT TGTCGCCCTC TGCCATCAAC CCGAATTTAA AGCGCTAAAT
TTTAGCCATT TAAAAATCAC CATTTCTGGC GGTACTGCAC TCACAGCCGC CGCTGCCAAT
CTGTGGCAAC AAACCACTGG TAATACTATT AGCGAAGGTT ATGGATTGTC AGAAACCTCG
CCTGTAATCT CTCTCAATGC GCCGGGATAT CAAAAGATCG GCACGATTGG CAAACCCGTT
CTCGGGACTG AGGTAAAACT CTTAGATGAA AGCGGCAACG AAGTCACCCA AGGCACCGCT
GGTGAGCTCG CAGCCCGTGG ACCACAGGTG ATGCTAGGTT ATTGGAATAA TCCACAAGAA
ACAGCCAATG TGATGACACC CGATGGCTTT TTTAAGACTG GGGATATTGC GATTCTTAAC
GAGGAAGGCT TCCATCAAAT CGTTGATCGT AAAAAGGATA TGATTATTGT CTCCGGCTTT
AACGTATATC CTAATGAAGT TGAGAATGTG CTTGCTAGCC ACCCTAATAT CATTGAATGC
GCCGTGGTTG GCGTAAAGGA TGATCACTCG GGGGAAGCGG TTAAAGCCTT TATCGTACTG
AAGGATGACA GCCAAGATCA TGAGAAAATA AAAACTGCCA TCCTCAACTT CTGCCGAGAG
CAACTCACGG CCTATAAGCT ACCTAAGCAG ATTGAATTTA TGTCACAACT ACCTAAGAGT
ACCGTGGGTA AAATTTTGCG CAGAGAGCTT AAAAACTAG
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| Protein sequence | MAYDQESQLE LGKYSSLIDL IERTSQRFGD KTAYACLGKN SSFNEIERDS RYFAAYLQNN
TNLKPGDRIA IQLPNITQFV IAAYGALRAG LILVNTNPLY TERELIHQFN DSGAKALVVL
SDLLPTLAKV VATTPIELVI STHPLDLIDP QVQPKTGLKN VEFCHVLQQG ALLPFTRFVP
TLSDLAALQY TGGTTGLSKG AMLTHGNMLA NAAQVKSRIG SVISEGEDIF VAPLPIYHIY
AFMVNLVLYF ECGGCSVLIP NPRDINGLIK TLAKYPFTGF AGLNTLFVAL CHQPEFKALN
FSHLKITISG GTALTAAAAN LWQQTTGNTI SEGYGLSETS PVISLNAPGY QKIGTIGKPV
LGTEVKLLDE SGNEVTQGTA GELAARGPQV MLGYWNNPQE TANVMTPDGF FKTGDIAILN
EEGFHQIVDR KKDMIIVSGF NVYPNEVENV LASHPNIIEC AVVGVKDDHS GEAVKAFIVL
KDDSQDHEKI KTAILNFCRE QLTAYKLPKQ IEFMSQLPKS TVGKILRREL KN
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