Gene SO_3648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3648 
Symbol 
ID1171308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3804903 
End bp3805664 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content47% 
IMG OID637345438 
Producthypothetical protein 
Protein accessionNP_719190 
Protein GI24375147 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTACGCTG ATACTCAAAA TGATATTACT CGGCAAGTTG TGCGGGTTGC ACAACTCTTG 
CTGGCCTACG GTGCTGAATC TGATTTAGTT GAAGAAATCA GCCAGCGCCT AGGTCAGGCC
TTAGGGTTGG CAAGTGTCGA GCTTTCTATC TCTTCTAATT CCCTCGTATT AACCAGTTTA
GTGCATGGTC GCTGTATCAC GACAACGCGT CGGATCCGTG AACATGGCAT TAACATGACC
ATAGTCTGCG AATTACAGCG CATTTGCTTA CTCGCAGAGA AAGGGCTTTA TGGCCCTAAC
GAAGTGCGTA AGCGCTTAGC TCGAATTGAG CCAAAAACCT ACCCACCTTA TTTGGTGGTG
TTAATGATAG GGTTATCCTG TGCCAGTTTT TGTCACCTCT TTGGCGGCGA TATCGCTGCG
AGTGTGATTA CCTTTTTTGC TTCTGCAATG GGAATGTCAG TACGACTGAC AATAGCTAAG
CGACACTTTA ATCTATTGGT GAATTTTGCG GTGACTGCCT TTGTCACCAG TATGATTGCT
CAGTTGGGTT ATATGTTTTC CTTAAGCGAT ACGCCTCAGT CAGCGATGGC AGCGAGTGTG
CTCATGCTGG TGCCTGGTTT TCCTATGATT AACGCCATTT CCGATATGGT TAAAGGCCAT
ATGAATGTCG GTATTTCCCG CTGGGGACAT GCGACTCTCT TGACCGTTTC TTCGGTCATT
GGCATCACGA TAGCAATGCA GCTTGGTGGT ATTTTTCTAT GA
 
Protein sequence
MYADTQNDIT RQVVRVAQLL LAYGAESDLV EEISQRLGQA LGLASVELSI SSNSLVLTSL 
VHGRCITTTR RIREHGINMT IVCELQRICL LAEKGLYGPN EVRKRLARIE PKTYPPYLVV
LMIGLSCASF CHLFGGDIAA SVITFFASAM GMSVRLTIAK RHFNLLVNFA VTAFVTSMIA
QLGYMFSLSD TPQSAMAASV LMLVPGFPMI NAISDMVKGH MNVGISRWGH ATLLTVSSVI
GITIAMQLGG IFL