Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3648 |
Symbol | |
ID | 1171308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3804903 |
End bp | 3805664 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637345438 |
Product | hypothetical protein |
Protein accession | NP_719190 |
Protein GI | 24375147 |
COG category | [S] Function unknown |
COG ID | [COG2966] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTACGCTG ATACTCAAAA TGATATTACT CGGCAAGTTG TGCGGGTTGC ACAACTCTTG CTGGCCTACG GTGCTGAATC TGATTTAGTT GAAGAAATCA GCCAGCGCCT AGGTCAGGCC TTAGGGTTGG CAAGTGTCGA GCTTTCTATC TCTTCTAATT CCCTCGTATT AACCAGTTTA GTGCATGGTC GCTGTATCAC GACAACGCGT CGGATCCGTG AACATGGCAT TAACATGACC ATAGTCTGCG AATTACAGCG CATTTGCTTA CTCGCAGAGA AAGGGCTTTA TGGCCCTAAC GAAGTGCGTA AGCGCTTAGC TCGAATTGAG CCAAAAACCT ACCCACCTTA TTTGGTGGTG TTAATGATAG GGTTATCCTG TGCCAGTTTT TGTCACCTCT TTGGCGGCGA TATCGCTGCG AGTGTGATTA CCTTTTTTGC TTCTGCAATG GGAATGTCAG TACGACTGAC AATAGCTAAG CGACACTTTA ATCTATTGGT GAATTTTGCG GTGACTGCCT TTGTCACCAG TATGATTGCT CAGTTGGGTT ATATGTTTTC CTTAAGCGAT ACGCCTCAGT CAGCGATGGC AGCGAGTGTG CTCATGCTGG TGCCTGGTTT TCCTATGATT AACGCCATTT CCGATATGGT TAAAGGCCAT ATGAATGTCG GTATTTCCCG CTGGGGACAT GCGACTCTCT TGACCGTTTC TTCGGTCATT GGCATCACGA TAGCAATGCA GCTTGGTGGT ATTTTTCTAT GA
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Protein sequence | MYADTQNDIT RQVVRVAQLL LAYGAESDLV EEISQRLGQA LGLASVELSI SSNSLVLTSL VHGRCITTTR RIREHGINMT IVCELQRICL LAEKGLYGPN EVRKRLARIE PKTYPPYLVV LMIGLSCASF CHLFGGDIAA SVITFFASAM GMSVRLTIAK RHFNLLVNFA VTAFVTSMIA QLGYMFSLSD TPQSAMAASV LMLVPGFPMI NAISDMVKGH MNVGISRWGH ATLLTVSSVI GITIAMQLGG IFL
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