Gene SO_3595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3595 
Symbol 
ID1171261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3757362 
End bp3758684 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content47% 
IMG OID637345392 
Productsensor protein RstB, putative 
Protein accessionNP_719138 
Protein GI24375095 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGGACAA GGCTACCTCT TCGCCCCAGA GGCTTGGAAC AACTAAGTAC TACCGTGAAA 
CGTCTCTTTA TCAGCTTATA TTTACTGCTG AGCCTCAGTT TTCTGGGCAT AGGCTGGACA
CTGGACAGCC TGTGGAAGAA AAATGTTGAT GAAAATAATC CCTTAGATGC TCCTCTGGTC
GCATTTGCCC AGCTGTTAAC CCAGCTTCCA GAGGAGAGTC GCCGCGATTA CTTAAGCGCA
CTGCCAACCG ATCCCCAGCT TCCGTTAAAC CTGCTGAGTC CAGATCAAAT TGCATTGCCA
AAGGATCAAA TTCTCACCTC CAATCACCTA GTCACCACCA CAACCAGTGA AGGTGAGCAA
TTCCAGTTTA TTCAGGTAGG CGAACAAGTG TTAATGGCGG GCCCTATCGA GATAGACCCA
AGAGCCGATC TGCGTAATTT ATTCACCCTA TTTTTCTATT TGTCGCTGGC ATTCGTGGCG
CTAATTTGGG TTGGGCCACT CTCGCGGGAT TTAAGTATTC TGCGTAAAGC CACCAAGGAT
TTTGGCGAAG CTAAGTGGGA TACTCGCATT AACCTCTCTA ACCGCTCTCA AGTAAAACCC
TTAGCCAATA CCTTTAATGA AATGGCGCGT CATATCAGCG CGTTAATTGA AAACCAAAAA
CATCTTTCCA ATGCGGTTTC CCACGAAATA CGCACCCCTC TGGCGCGGCT AAAATTCGCC
CTTGCCTTAA TGCCCATGTA CTGCAAACCC GACTCTGACG AACAAACACG TCAGGATTTT
CTCAATGAAA TGCAGCTCGA CATTAAGGAA ATGGAAAACC TACTGCAGGA ATTACTCACC
TACGCCAGTT TAGAGTCCCA GCGTGAAGGT ATACCTTTGG ATGAATACGA CCTTATCACG
CTGATTAACC AGTGCATTAA GCGCTTAAGT ACATTAAGTG AAACCCCAAT AACCTTACAT
GCAGATATGG ACGCTTTACC CTTGGTCGGT GAACCCGCTC TGATTGAACG TGCTCTGCAA
AATCTACTGA CCAATGCGCA ACGTTTTGCC CGCCATCAAA TCTTGATTGA AGTTAGCCAA
ACCCCGCAAC GGGTAACTTT AAGTGTGAGC AATGATGGAG AGCCGATCCC CGAGGTGGAT
TTACCTAAGG TGTTTGAGCC CTTCTATCGC AGCCAGTCGG TGCAAAATGG TAACAAAGGT
CATGGTTTAG GCCTGGCGAT CATCAAGAGG ATCATGCAGC GCCATCAGGG AGAAGTGAGT
GTAAGCAGTA ATCCTACTCA GACACGTTTT ACCTTAAGTT GGCCAAAGAA ACGGGAAATT
TAA
 
Protein sequence
MGTRLPLRPR GLEQLSTTVK RLFISLYLLL SLSFLGIGWT LDSLWKKNVD ENNPLDAPLV 
AFAQLLTQLP EESRRDYLSA LPTDPQLPLN LLSPDQIALP KDQILTSNHL VTTTTSEGEQ
FQFIQVGEQV LMAGPIEIDP RADLRNLFTL FFYLSLAFVA LIWVGPLSRD LSILRKATKD
FGEAKWDTRI NLSNRSQVKP LANTFNEMAR HISALIENQK HLSNAVSHEI RTPLARLKFA
LALMPMYCKP DSDEQTRQDF LNEMQLDIKE MENLLQELLT YASLESQREG IPLDEYDLIT
LINQCIKRLS TLSETPITLH ADMDALPLVG EPALIERALQ NLLTNAQRFA RHQILIEVSQ
TPQRVTLSVS NDGEPIPEVD LPKVFEPFYR SQSVQNGNKG HGLGLAIIKR IMQRHQGEVS
VSSNPTQTRF TLSWPKKREI