Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3592 |
Symbol | |
ID | 1171258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 3755361 |
End bp | 3756275 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637345389 |
Product | hypothetical protein |
Protein accession | NP_719135 |
Protein GI | 24375092 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3713] Outer membrane protein V |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTAATCT GTTGCCCATT ACCGACTGAC ATTAAACCCG AACGCAAAAT CATGTATCGA ACATTATTAA TCTTACTCGC CGCACTCAGC CTGCCTTCAA TCGGGGTGGC AAAAGAGCCG TGCGTGACTA AAGATGAATG TATTGAAATG CGCAATTGGG ACTTAGGCGT GGCAATAGGC TGGGGGCAAA AAACTAATCC ACTTAGGGAT TTTGATGATA TTCCGGTCTT TTTTATCCCG ACAGTGGCTT ACTATGGTGA GCATTGGTTT TTTGATAATG GCAACTTAGG GTATAGCCTA GTTGAACAGC AATATTTCAG CTTAAACTTA GTAACCAGCT ATAGCATGGA CAGAGCTTAT TTCTATCGCT GGGATCCTTC AAATATCTTT TTAAAACGCA GTACACAGGA CGGGGTAAGA ATGCTCGACA CCCCAGCAGT GATAAACGCT GAACCTGAAC CTGTGTTTAA TTCCTTAGAA TCGCGCAATT TTACCTTGTT AGGTGGCGCC GAAGCATTTA TTTATACCCC GTTAGGTGTA GTTAGGTTAG CCTACACCCA TGATATGTTT AATGTGCATC AAGGTGCTGA AGCACAAATA AAATGGACCT ATGGCTGGCA TTTAACTCGC TGGGTCTTTG ATATGTCACT CGTCCTTGAT TGGAAAAGCA CTAATGTGGT TGACTATTAT TATGGCGTTC GCCCGAGTGA AAATACCTAT TGGAGCCAAC ATTACCATGC TGATGCTGGT TGGGATAAAG GGGTAGAAAT GACAGCCCGT TATATCTTAA CAGATAATTG GGATATGCTA TTTGCATTCC GCTACACTCA AATTGCAGAT GAAATTGCCG CCAGTCCCTT GCTCGATCAA GACTATAGCA GTACATATTT TATTGGCGCA GCATATAGGT TTTAA
|
Protein sequence | MLICCPLPTD IKPERKIMYR TLLILLAALS LPSIGVAKEP CVTKDECIEM RNWDLGVAIG WGQKTNPLRD FDDIPVFFIP TVAYYGEHWF FDNGNLGYSL VEQQYFSLNL VTSYSMDRAY FYRWDPSNIF LKRSTQDGVR MLDTPAVINA EPEPVFNSLE SRNFTLLGGA EAFIYTPLGV VRLAYTHDMF NVHQGAEAQI KWTYGWHLTR WVFDMSLVLD WKSTNVVDYY YGVRPSENTY WSQHYHADAG WDKGVEMTAR YILTDNWDML FAFRYTQIAD EIAASPLLDQ DYSSTYFIGA AYRF
|
| |