Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3541 |
Symbol | |
ID | 1171212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3694596 |
End bp | 3696062 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637345340 |
Product | sodium:alanine symporter family protein |
Protein accession | NP_719088 |
Protein GI | 24375045 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1115] Na+/alanine symporter |
TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGAAA CTATTGTAAA TTTTTTGAAC GCACTCCTTT GGGGCAAGCT GCTCGTATAT GGATTAGTTG GAGCTGGTCT ATATTTCACC TTACGGCTTG TTTTTATTCA ACTTACACAT TTTAAACACT CTCTTAAAAT CATGACGATG AGCCGTCAAG GTTGCGAGAG TGGTCTGTCT TCATTCCAAG TGTTTTGTAC CAGTATGGCT GCTCGTGTTG GGGCTGGGAA TATGGCTGGG GTTGCTGTCG CAATTGGCGC AGCAGGTCCT GGCGCAGTAT TCTGGATGTG GTTAATTGCC ATGTTAGGGA TGGCGACTGC CATGGTGGAG TCAACACTTG CGCAAGTCTA TAAAGTACGT GATGCCAATG GCCAATTTCG CGGAGGTCCT TCTTATTATA TGGAGAAAGG GCTTGGTCAG AGATGGATGG GAGTGCTGTT TGCTTTCTTT CTGATTATCG CGTTCGGTTT AGTGTTTAAT GCTGTTCAGG CGAATACGAT TACGGGGGCA ATGGAGCGGG TATTTGGGTT TGATCCGACC TATGTCGGCA TTGGGTTGGT GCTAGCCAGT GGCTTTGTGA TTATGGGGGG GCTGCGTAAA GTCGCACGAG TGTCAGAGTT TATTGTTCCT ATTATGGCTC TAGCCTACAT TCTGATTGCA TTTATTATTG TGCTATTCAA TTTAGAGCAA TTGCCAGCCG TGATTAGTCT GATCGTGAAA AGTGCCTTTG GTTGGCAAGA AGCTGCTGCG GGTGGTGTTG CCTACACTGT CGCTCAGGCT ATGCAAGCGG GTATTGCGCG TGGGCTTTTC TCAAACGAGG CGGGGATGGG AAGTGCGGCA AACGTTGCTG CAAGTGCATC ACCTAACCCT AATCATCCGG CATCCCAAGG TTTTGTGCAA ATGATGGGGG TATTTGTTGA TACCATCGTG ATTTGTACCG CAACGGCTGC CATTATTCTG CTTTCTGGGG ATATTGGTTC TAGTGATGAT GGTATTCGTC TCACAATCAA TGCGATGTCA AACCATGTGG GCGATTGGGG CGGAGCCTTT ATTGCCGTAG CCATTTTCCT ATTCTGTTTT ACTTCTATTA TTGCTAACTA TTCCTATGCA GAAACCAACG TGATGTTTTT AACGGGTAAC AGTACTAAGG CATTACCGTT ATTTCGCCTG TGTGTGCTGG GGATGGTGAT GTTTGGCTCT GTGGCTAAAA TTAGCTTAGT TTGGAACTTA GCGGATGTGT CAATGGGGTT AATGGCAACG GTCAATATAG TCGCTTTGTT ATTGTTGTCT GGTTTGGCTA TTCGAGTGAT CAATGATTAC TGCGATCAAC TTAAGAGCGG TAAAATGCCT GAGTTTGATC GAAGTAAGTT TCCTGAGTTA ATGGAACAAC TTGACGATGG AATTTGGCAG GATAACAGCG TAAACGAACT GGCTAAAGCG CCTTCTGAAT CTGCTATCAG TCGATAA
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Protein sequence | MLETIVNFLN ALLWGKLLVY GLVGAGLYFT LRLVFIQLTH FKHSLKIMTM SRQGCESGLS SFQVFCTSMA ARVGAGNMAG VAVAIGAAGP GAVFWMWLIA MLGMATAMVE STLAQVYKVR DANGQFRGGP SYYMEKGLGQ RWMGVLFAFF LIIAFGLVFN AVQANTITGA MERVFGFDPT YVGIGLVLAS GFVIMGGLRK VARVSEFIVP IMALAYILIA FIIVLFNLEQ LPAVISLIVK SAFGWQEAAA GGVAYTVAQA MQAGIARGLF SNEAGMGSAA NVAASASPNP NHPASQGFVQ MMGVFVDTIV ICTATAAIIL LSGDIGSSDD GIRLTINAMS NHVGDWGGAF IAVAIFLFCF TSIIANYSYA ETNVMFLTGN STKALPLFRL CVLGMVMFGS VAKISLVWNL ADVSMGLMAT VNIVALLLLS GLAIRVINDY CDQLKSGKMP EFDRSKFPEL MEQLDDGIWQ DNSVNELAKA PSESAISR
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