Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3538 |
Symbol | hlyU |
ID | 1171209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3691803 |
End bp | 3692099 |
Gene Length | 297 bp |
Protein Length | 98 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637345337 |
Product | transcriptional regulator HlyU |
Protein accession | NP_719085 |
Protein GI | 24375042 |
COG category | [K] Transcription |
COG ID | [COG0640] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTG AATTGATGCA GGAGCGAGCC GATCATGCCG TGGTGCTATT AAAGGCACTC GCAAACGAAC GCCGTTTATT TATCCTTTGT TATTTATTGA ATGAAGGAGA AATGTGCGTT GGCGAAATGA ATAAAAAATT AGGCTTAAGT CAATCGGCAC TATCACAACA CCTTGCTTGG TTGCGCAAAG ATAATTTAGT GACCACACGC AAAGAAGCGC AAACTGTATT CTACTCACTG AAAAGTGATG AGGTACGTGA GATGATCCAT TTATTGAACA ATATTTATTG TCATTAA
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Protein sequence | MNIELMQERA DHAVVLLKAL ANERRLFILC YLLNEGEMCV GEMNKKLGLS QSALSQHLAW LRKDNLVTTR KEAQTVFYSL KSDEVREMIH LLNNIYCH
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