Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3503 |
Symbol | |
ID | 1171177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3653558 |
End bp | 3654865 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637345305 |
Product | glucose/galactose transporter |
Protein accession | NP_719050 |
Protein GI | 24375007 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACTCG ATAAAAGCCA GCAGAAAAGC AGTTTTCTCC CCATGGCGAT AGTGGCAGCA CTCTTTTTCA TCCTCGGATT CGCAACTTGG TTGAATGGAT CTTTGATGCC CTATTTAAAA CAAATTTTGC AACTTAATCC CTTCCAAGCT TCATTAATCC TGTTTTCTTT CTATATTGCG GTGACTTTTA CTGCGCTTCC CTCAGCTTGG GTAATCCGTA AAGTGGGCTA CAAAAATGGT ATGGCCTTGG GCATGGGCGT GATGATGATT GCTGGCTTAC TGTTTATTCC TGCGGCGAAG ACTCAAGTCT TCGCCCTATT TTTATTTGCC CAATTAGTGA TGGGTGCGGG GCAGACGTTA CTGCAAACCG CGGTCAACCC CTATGTTGTT CGCCTTGGGC CTGAAGAATC TGCGGCAGCG CGTGTTAGTG TCATGGGGAT TTTGAACAAA GGCGCGGGGG TGATTGCGCC ATTAGTGTTC TCTGCGTTGA TTTTAGATAG CTTTAAAGAC CGTATTGGCA CAACGTTGAC GCAAGTGCAA ATTGATGAAA TGGCTAATGG TTTAGTCTTA CCCTACTTAG GTATGGCTGT GTTTATCGGT ATTTTGGCGT TAGCGGTAAA GAAATCCCCG CTGCCAGAGT TATCTAATGA AGACGAAGTT GCTGATCATA CTGATAAAAG CCAAATTAAA GCGGCATTAT CTCACCCTAA CTTAGCGTTA GGCGTGTTGG CGCTGTTTGT GTACGTTGCG GTAGAGGTGA TTGCTGGCGA TACCATTGGC ACCTTTGCAT TATCCTTGGG TATTGATCAT TATGGAGTGA TGACGTCCTA TACCATGGTC TGTATGGTTC TCGGTTATAT CTTAGGGATA TTATTGATTC CTCGCGTTAT TTCTCAACCT ACGGCACTGA TGATTTCTGC AATTCTTGGC CTATTGTTAA CATTAGGCAT TCTGTTTGGA GATAACAATT CCTACGCAAT TGCAAATCTT CTATTGGTTC CTTTTGGCGG TGTAGCTCTA CCTGATACCT TGTTGTTGAT TGCCTTCTTA GGGTTAGCTA ATGCGATCGT ATGGCCTGCA GTATGGCCTC TAGCCTTGTC TGGTATGGGC AAGTTAACGA GCACAGGTTC TGCGCTCCTT ATCATGGGTA TTGCGGGCGG TGCCTTTGGT CCGGTGTCTT GGGGGTTAAT GAGTTCGGCT ACGGATATGG GGCAGCAGGG TGGTTATATG GTGATGTTAC CTTGCTACCT GTTTATTCTT TTCTATGCTG TCAAAGGCCA TAAGATGCGC AGTTGGTCTG CTAAATAA
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Protein sequence | MTLDKSQQKS SFLPMAIVAA LFFILGFATW LNGSLMPYLK QILQLNPFQA SLILFSFYIA VTFTALPSAW VIRKVGYKNG MALGMGVMMI AGLLFIPAAK TQVFALFLFA QLVMGAGQTL LQTAVNPYVV RLGPEESAAA RVSVMGILNK GAGVIAPLVF SALILDSFKD RIGTTLTQVQ IDEMANGLVL PYLGMAVFIG ILALAVKKSP LPELSNEDEV ADHTDKSQIK AALSHPNLAL GVLALFVYVA VEVIAGDTIG TFALSLGIDH YGVMTSYTMV CMVLGYILGI LLIPRVISQP TALMISAILG LLLTLGILFG DNNSYAIANL LLVPFGGVAL PDTLLLIAFL GLANAIVWPA VWPLALSGMG KLTSTGSALL IMGIAGGAFG PVSWGLMSSA TDMGQQGGYM VMLPCYLFIL FYAVKGHKMR SWSAK
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