Gene SO_3503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3503 
Symbol 
ID1171177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3653558 
End bp3654865 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content45% 
IMG OID637345305 
Productglucose/galactose transporter 
Protein accessionNP_719050 
Protein GI24375007 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID[TIGR01272] glucose/galactose transporter 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTCG ATAAAAGCCA GCAGAAAAGC AGTTTTCTCC CCATGGCGAT AGTGGCAGCA 
CTCTTTTTCA TCCTCGGATT CGCAACTTGG TTGAATGGAT CTTTGATGCC CTATTTAAAA
CAAATTTTGC AACTTAATCC CTTCCAAGCT TCATTAATCC TGTTTTCTTT CTATATTGCG
GTGACTTTTA CTGCGCTTCC CTCAGCTTGG GTAATCCGTA AAGTGGGCTA CAAAAATGGT
ATGGCCTTGG GCATGGGCGT GATGATGATT GCTGGCTTAC TGTTTATTCC TGCGGCGAAG
ACTCAAGTCT TCGCCCTATT TTTATTTGCC CAATTAGTGA TGGGTGCGGG GCAGACGTTA
CTGCAAACCG CGGTCAACCC CTATGTTGTT CGCCTTGGGC CTGAAGAATC TGCGGCAGCG
CGTGTTAGTG TCATGGGGAT TTTGAACAAA GGCGCGGGGG TGATTGCGCC ATTAGTGTTC
TCTGCGTTGA TTTTAGATAG CTTTAAAGAC CGTATTGGCA CAACGTTGAC GCAAGTGCAA
ATTGATGAAA TGGCTAATGG TTTAGTCTTA CCCTACTTAG GTATGGCTGT GTTTATCGGT
ATTTTGGCGT TAGCGGTAAA GAAATCCCCG CTGCCAGAGT TATCTAATGA AGACGAAGTT
GCTGATCATA CTGATAAAAG CCAAATTAAA GCGGCATTAT CTCACCCTAA CTTAGCGTTA
GGCGTGTTGG CGCTGTTTGT GTACGTTGCG GTAGAGGTGA TTGCTGGCGA TACCATTGGC
ACCTTTGCAT TATCCTTGGG TATTGATCAT TATGGAGTGA TGACGTCCTA TACCATGGTC
TGTATGGTTC TCGGTTATAT CTTAGGGATA TTATTGATTC CTCGCGTTAT TTCTCAACCT
ACGGCACTGA TGATTTCTGC AATTCTTGGC CTATTGTTAA CATTAGGCAT TCTGTTTGGA
GATAACAATT CCTACGCAAT TGCAAATCTT CTATTGGTTC CTTTTGGCGG TGTAGCTCTA
CCTGATACCT TGTTGTTGAT TGCCTTCTTA GGGTTAGCTA ATGCGATCGT ATGGCCTGCA
GTATGGCCTC TAGCCTTGTC TGGTATGGGC AAGTTAACGA GCACAGGTTC TGCGCTCCTT
ATCATGGGTA TTGCGGGCGG TGCCTTTGGT CCGGTGTCTT GGGGGTTAAT GAGTTCGGCT
ACGGATATGG GGCAGCAGGG TGGTTATATG GTGATGTTAC CTTGCTACCT GTTTATTCTT
TTCTATGCTG TCAAAGGCCA TAAGATGCGC AGTTGGTCTG CTAAATAA
 
Protein sequence
MTLDKSQQKS SFLPMAIVAA LFFILGFATW LNGSLMPYLK QILQLNPFQA SLILFSFYIA 
VTFTALPSAW VIRKVGYKNG MALGMGVMMI AGLLFIPAAK TQVFALFLFA QLVMGAGQTL
LQTAVNPYVV RLGPEESAAA RVSVMGILNK GAGVIAPLVF SALILDSFKD RIGTTLTQVQ
IDEMANGLVL PYLGMAVFIG ILALAVKKSP LPELSNEDEV ADHTDKSQIK AALSHPNLAL
GVLALFVYVA VEVIAGDTIG TFALSLGIDH YGVMTSYTMV CMVLGYILGI LLIPRVISQP
TALMISAILG LLLTLGILFG DNNSYAIANL LLVPFGGVAL PDTLLLIAFL GLANAIVWPA
VWPLALSGMG KLTSTGSALL IMGIAGGAFG PVSWGLMSSA TDMGQQGGYM VMLPCYLFIL
FYAVKGHKMR SWSAK