Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3473 |
Symbol | |
ID | 1171149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3619269 |
End bp | 3620192 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637345279 |
Product | LysR family transcriptional regulator |
Protein accession | NP_719022 |
Protein GI | 24374979 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAGAC TCGAGGCGGC AAAGGTGTTT GTAACTATTG TGGAACGTGG CAGCATGATT GGTGCCGCTG AGGTTTTAGA TATGTCTCGC TCTATGGTGA CCCGATATTT AAGCGAGATG GAGGAATGGT CAGGCGCACG TTTACTGCAC CGCTCCACAA GACGTTTGAG TCTAACCAGT GCGGGCGAAC AAGTGCTCGA TTATTGCCAG CGTTTACTTG AATTAGCACA GGAAGTCCCC GCCGTTAGTC ATGCCCAAAG TGCCCAACCT CGAGGGTTAC TGCGGATCAG CTGCTCGCAA TTTATGGCGC ATCTCATTCT TCCCACGGTT GTGCGCCCCT ATTTAGCCCA ATACCCGCAG GCGAGTGTGA ACTTTCATGT TAGTAGCCAA ACCGTTGATC TAGTGGCCGA GCGTATCGAT ATGGCGATTA GGATCACCAA TGAGCTCGAT CCGAGTTTAA TCGCTAGGCG CTTAGGGGAA TGTGAATCCG TGGTCTGCGC TGCGCCTCGA TACCTTGCAA GTCATTCACC CATCATTCAG CCCGAGGATT TAACTCGGCA TAACTGTTTA ACCTATTCTT ATTTTGGCGA TGTGATGTGG CGTTTTACCC AAATAAATCA TTTAGTCACT CATCCTGACG GCAAATCAGC GGGGCAGCAA TTTAATATCC CCGTAAAAGG TAACTTAAGT GCCAATGATT CTATGGTGGT ACTAAACGCC ACCTTGGCGG GCGAGGGGAT TGCGATGCAG CCCGTGTGGG CGGTGAAGTC TTACTTAAAC TCTGGTGAGT TGGTGCCTTT ACTTCGCGAT TTTAAGCCCC AGTCGTTAGG TGTGTATGGC GTTTATCAAT CCCGTAAACA TATGCAGCCT ACATTAAGGG TTATGATGGA TATGCTGGTG GCCTACTTTG CCAGCAGTAG ATAG
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Protein sequence | MDRLEAAKVF VTIVERGSMI GAAEVLDMSR SMVTRYLSEM EEWSGARLLH RSTRRLSLTS AGEQVLDYCQ RLLELAQEVP AVSHAQSAQP RGLLRISCSQ FMAHLILPTV VRPYLAQYPQ ASVNFHVSSQ TVDLVAERID MAIRITNELD PSLIARRLGE CESVVCAAPR YLASHSPIIQ PEDLTRHNCL TYSYFGDVMW RFTQINHLVT HPDGKSAGQQ FNIPVKGNLS ANDSMVVLNA TLAGEGIAMQ PVWAVKSYLN SGELVPLLRD FKPQSLGVYG VYQSRKHMQP TLRVMMDMLV AYFASSR
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