Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3471 |
Symbol | glyA |
ID | 1171147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3616031 |
End bp | 3617284 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637345277 |
Product | serine hydroxymethyltransferase |
Protein accession | NP_719020 |
Protein GI | 24374977 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAAAA AAGATATGAA TATCGCAGAT TATGATCCGG AACTGTTCAA CGCAATTCAG AACGAAACTC TGCGTCAAGA AGAGCATATT GAGCTGATTG CTTCTGAAAA CTACACCAGT CCACGCGTGA TGCAAGCACA AGGTTCACAA TTAACCAACA AGTACGCCGA AGGTTATCCT GGCAAGCGTT ACTACGGTGG TTGTGAGTAT GTGGACGTAG TTGAAACCTT AGCGATTGAG CGTGCAAAAC AACTGTTTGG TGCGACTTAC GCAAACGTAC AACCTCACTC AGGTTCTCAA GCAAACAGCG CCGTTTATAT GGCATTGTTA AAACCAGGCG ATACCGTTTT AGGGATGAAT TTAGCCCACG GTGGTCACTT GACCCACGGT TCACCTGTAA ACTTCTCAGG TAGACTGTAC AACATCATTC CTTACGGTAT CGATGAATCA GGCAAAATCG ACTATGACGA AATGGAACGT CTGGCCGTAG AACACAAACC TAAGATGATG ATCGGTGGTT TCTCTGCTTA CTCAGGTATT GTTGACTGGG CAAGAATGCG CGAAATTGCA GACAAAATCG GTGCTTATCT GTTCGTTGAT ATGGCGCACG TAGCGGGTCT TATTGCTGCT GGCGTGTATC CAAACCCTGT GCCACACGCT CACGTTGTGA CTTCAACGAC CCACAAGACC TTAGCGGGTC CTCGTGGTGG TATCATCCTG TCTGCTGCCG ATGATGAAGA GCTATACAAG AAGCTAAACT CTGCGGTATT CCCTGGCGGT CAAGGTGGTC CTTTGATGCA CGTTATCGCG GGTAAAGCGG TTGCCTTCAA AGAAGCTCTA GAGCCAGAAT TCAAAACCTA CCAACAGCAA GTGGTTAATA ATGCTAAAGC TATGGTTGAA GTGTTCCTTG AGCGCGGTTA CAAAATCGTC TCTGGCGGAA CCAGCAACCA CTTAATGCTA GTTGACCTGA TTGGTCGTGA CTTGACCGGT AAAGAAGCCG ATGCCGCCTT AGGCAGCGCT AACATTACCG TGAATAAAAA CTCAGTGCCG AATGACCCTC GTTCACCATT CGTGACTTCT GGTGTACGTA TCGGTACCCC TGCGATTACG CGCCGTGGCT TTAAAGAAGC CGAAGCGAAA CAATTAACTG GTTGGATCTG TGACATCCTC GACGATGCCC ATAATCCTGC GGTCATCGAG CGCGTAAAAG GCCAAGTATT GGCACTGTGC GCTCGTTTCC CTGTTTACGG TTAA
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Protein sequence | MLKKDMNIAD YDPELFNAIQ NETLRQEEHI ELIASENYTS PRVMQAQGSQ LTNKYAEGYP GKRYYGGCEY VDVVETLAIE RAKQLFGATY ANVQPHSGSQ ANSAVYMALL KPGDTVLGMN LAHGGHLTHG SPVNFSGRLY NIIPYGIDES GKIDYDEMER LAVEHKPKMM IGGFSAYSGI VDWARMREIA DKIGAYLFVD MAHVAGLIAA GVYPNPVPHA HVVTSTTHKT LAGPRGGIIL SAADDEELYK KLNSAVFPGG QGGPLMHVIA GKAVAFKEAL EPEFKTYQQQ VVNNAKAMVE VFLERGYKIV SGGTSNHLML VDLIGRDLTG KEADAALGSA NITVNKNSVP NDPRSPFVTS GVRIGTPAIT RRGFKEAEAK QLTGWICDIL DDAHNPAVIE RVKGQVLALC ARFPVYG
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