| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3464 |
|---|
| Symbol | thiL |
|---|
| ID | 1171140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 3610267 |
|---|
| End bp | 3611223 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637345270 |
|---|
| Product | thiamin-monophosphate kinase |
|---|
| Protein accession | NP_719013 |
|---|
| Protein GI | 24374970 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0611] Thiamine monophosphate kinase |
|---|
| TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGAAT TCCAACTTAT TGAATGTTAT TTCAATCACC GCGGCCCGAC GCGCCGTGAT
GTCAAATTAA GTATTGGTGA CGATTGCGCC CTTGTGCAGC CCGCCGAAAA CAAGTCGATC
GCCATTTCCT GCGATACCTT AGTCGAAAAT GTTCACTTCT TCCCTGATAT TCCACCTCAA
GCCTTAGGTT ACAAAGCCCT AGCGGTAAAT CTTTCTGATT TAGCGGCAAT GGGGGCTGAG
CCTGCATGGA TGACGCTTGC ACTCACTTTG CCTGAGGTTA ACGAGACATG GCTAAGTGGT
TTTAGTGAAG GCCTCTTTGA AGCGGCAGAT TATTACGGTA TTGCCTTAAT TGGTGGTGAC
ACGACTCGCG GGCCCAGAGC GATTAATATC ACAGTGCATG GGCAAGTGCC GCAAGGTAAA
GCATTGACTC GTCATGGTGC TAAAGCTGGC GACTGGATCT ATGTGACGGG GACGCTTGGT
GATTCAGCCT TAGGGCTGGA CTTGATCCGC TGTGTGCAAC ATGCACGAGC GGAGCACAAA
GAGTTCTTAA TTAATCGCCA TTATCGTCCG ACACCGAGAG TATTAGCGGG GCAGTCATTA
CGCTCTTTGG CATCCAGTGC CATCGATCTA TCCGACGGTT TTATCTCGGA TATTGGGCAT
ATCCTCAAGG CGTCAAAGGT TGGTGCGGTC GTTGATGTTG GCGCTATTCC TTTATCTCGT
GCGATGCAAG ACACCGTGAG TGAAGAGCAT GCTTTAGGTT ATGCACTCAC GGGTGGCGAA
GATTATGAGC TGTTATTTAC TGTGCCAGAG GCGCAAAAAG GTGCGTTAGA AACCGCCCTC
AGCCATGCAG GTACTAAGTT TGTCCGTGTT GGGCAAATCT GTGCGGGCAG TAAGCTTAAG
TTGCAACTTA ATGGTGAGCT ATTTACGCCA CCGTACCATG GTTTTGAGCA TTTTTAA
|
|---|
| Protein sequence | MKEFQLIECY FNHRGPTRRD VKLSIGDDCA LVQPAENKSI AISCDTLVEN VHFFPDIPPQ
ALGYKALAVN LSDLAAMGAE PAWMTLALTL PEVNETWLSG FSEGLFEAAD YYGIALIGGD
TTRGPRAINI TVHGQVPQGK ALTRHGAKAG DWIYVTGTLG DSALGLDLIR CVQHARAEHK
EFLINRHYRP TPRVLAGQSL RSLASSAIDL SDGFISDIGH ILKASKVGAV VDVGAIPLSR
AMQDTVSEEH ALGYALTGGE DYELLFTVPE AQKGALETAL SHAGTKFVRV GQICAGSKLK
LQLNGELFTP PYHGFEHF
|
|---|
| |