| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3455 |
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| Symbol | relA |
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| ID | 1171131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3598092 |
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| End bp | 3600299 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637345261 |
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| Product | GTP pyrophosphokinase |
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| Protein accession | NP_719004 |
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| Protein GI | 24374961 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCTCTG TTCGCGAAGC GCACTTTAAT GATCCCGATT TTCATCTTGA AGAGTGGGTG
GCTCGCTATG TCAGTCATGT CGATGAAGCG CAAACCTTAC TCGCCCTGAT TGCGCAGGTG
GACGCCTTAC CCGCTAAGAG TCCTGCCGCG AAAAGAGAAC TGCTTGAACA TGCCCGCGAG
ATGATTGAAA TTCTCGCGCC ACTGAATATG GACATAGAAA CACTGCAAGC GGCCATTCTG
TTTGTGGTGT TTGATGCTGG CTTATTAAAC GAAGAAGCGA TCAAAGAAAA ATTTGGTGAG
CCACTCGCGC GTTTAGTCGC GAGTGTGGTG ACCATGAATG CCATTGGTGC GTTAAAAATC
AATCCCAATA GTCGCTCAAC CGAGCCGCAA ATCGACAATA TCCGCCGCAT GTTGCTGGCC
ATGGTCGAAG ATGTGCGCGC GGTGGTGATT AAACTGGCCG AGCGTGTCTG TTTGCTGCGC
GCCGTGAAAA ATGCCGATGA AGAAACCCGC GTTTTGCTAG CACGCGAAAT TGCCGACATC
TATGCGCCGC TTGCTAACCG TTTGGGGATT GGTCAGTTAA AGTGGGAATT AGAAGATATT
TCCTTCCGTT ATCTGCACCC TGATACTTAC AAAGAGATTG CAAAACAGCT AGACGGAAAA
CGTTTGGATC GCGAAGTCTT TATCGAAAAT TTTGTCGAGC AATTGCAGCA GCGCCTCGAT
GAGGACCATA TCCGCGCTAA GGTGTATGGT CGTCCAAAAC ATATCTACAG CATCTGGCGC
AAGATGAAGG GCAAACACCT CAAGTTTGAT GAGTTGTTTG ACGTGCGCGC CGTGCGAATT
GTCACCGAGC GTTTGCAGGA CTGTTACGGC GCCTTAGGGG TGGTGCACAC GCTATGGCAC
CATATTCCGC GCGAGTTCGA CGACTATGTG GCCAACCCTA AACCTAATGG TTATCAATCG
ATCCATACCG TTGTTGTGGG GCCTGAGGGT AAAACCGTTG AAATTCAAAT TCGTACCCAA
GATATGCATG AAGATGCAGA GCTGGGGGTT GCCGCGCACT GGAAGTACAA AGAGGGCAAT
CACTCCGGCA AACAAAGCGG CTACGAAGAA AAAATCAATT GGCTGCGTAA AATCCTGCAA
TGGCAGGAAG ACGTGGTTGA AAGCGGCAAT TTGGTCGAAG AAGTCCGCAG CCAAGTGTTT
GAAGACCGAG TCTATGTCTT TACCCCAAGC GGTGAAGTGG TCGACTTACC GCTCGGCTCA
ACCGTGCTCG ACTTTGCCTA CTATATTCAC TCGCAGGTCG GTCATAAGTG TATTGGCGCT
AAGGTTGATG GCCGCATTGT GCCGTTTACC TATCAAGTCG AAACTGGCGA GCGTATCGAG
ATCATCACCT CGAAACACCC TAATCCTAAG CGCGATTGGC TCAATCCAAA CTTAGGTTAT
ATCCGCACAT CGCGGGCGCG CTCGAAAATT CAGCATTGGT TTAAGCAGCA AGACCGCGAT
AAAAATATTA TCGCCGGTAA AGAGATGCTC GAAGCCGAGT TGGCGAGAGT CAGCCTGAGA
ATTAAAGATG CCACCATTGC CGTTGAGCGC TTTAATATGG CGAGTATGGA CGATTTACTC
GCCGCTATCG GCGGCGGTGA TGTGCGTTTG CATCAAGTCG TTAACCATAT TCAAAGTAAG
TTGCGCCTCG ATGAAGCCAG TGAAGAAGAT GCGGTAGAAG AATTAGTTAA AAAGAGCCAA
TCTAAATCTG GCACCAACAG CCGTGGGCAG GTTGAGGTGA ATGGTGTGGG TAACTTACTC
AGCCATATCG CCCGTTGCTG CCAGCCCGTG CCCGGGGATG AGATTTTAGG CTTTATCACC
AAAGGGCGCG GTATTTCGGT GCATCGCTCC GACTGTGAGC AGGTGAAAGA GTTAATGCGC
GTTCACCCTG AGCGTGGCGT CGATGTGGTT TGGGGCGAAA ATTACTCCGG CGGTTATCGC
ATGCGCCTGC GCGTCTTAGC CCATGATCGC AGCGGATTAT TGCGGGATCT CACCTCGGTA
CTTGCCGCCG AAAAGTCCAA TGTGCTCGCC ATGAGCTCGT CATCGGATAT TAAGAATCAG
ACGGCAGCCA TTGAGCTGGA ATTAGAGCTA TACAACCTCG ATGGCTTATC GCGGGTGTTA
TCTAAGCTCT CCCAAGTCGA TAGCGTGATT GAAGCACGCA GATTGTAA
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| Protein sequence | MVSVREAHFN DPDFHLEEWV ARYVSHVDEA QTLLALIAQV DALPAKSPAA KRELLEHARE
MIEILAPLNM DIETLQAAIL FVVFDAGLLN EEAIKEKFGE PLARLVASVV TMNAIGALKI
NPNSRSTEPQ IDNIRRMLLA MVEDVRAVVI KLAERVCLLR AVKNADEETR VLLAREIADI
YAPLANRLGI GQLKWELEDI SFRYLHPDTY KEIAKQLDGK RLDREVFIEN FVEQLQQRLD
EDHIRAKVYG RPKHIYSIWR KMKGKHLKFD ELFDVRAVRI VTERLQDCYG ALGVVHTLWH
HIPREFDDYV ANPKPNGYQS IHTVVVGPEG KTVEIQIRTQ DMHEDAELGV AAHWKYKEGN
HSGKQSGYEE KINWLRKILQ WQEDVVESGN LVEEVRSQVF EDRVYVFTPS GEVVDLPLGS
TVLDFAYYIH SQVGHKCIGA KVDGRIVPFT YQVETGERIE IITSKHPNPK RDWLNPNLGY
IRTSRARSKI QHWFKQQDRD KNIIAGKEML EAELARVSLR IKDATIAVER FNMASMDDLL
AAIGGGDVRL HQVVNHIQSK LRLDEASEED AVEELVKKSQ SKSGTNSRGQ VEVNGVGNLL
SHIARCCQPV PGDEILGFIT KGRGISVHRS DCEQVKELMR VHPERGVDVV WGENYSGGYR
MRLRVLAHDR SGLLRDLTSV LAAEKSNVLA MSSSSDIKNQ TAAIELELEL YNLDGLSRVL
SKLSQVDSVI EARRL
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