Gene SO_3437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3437 
SymbolispF 
ID1171112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3581793 
End bp3582272 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content51% 
IMG OID637345246 
Product2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
Protein accessionNP_718990 
Protein GI24374947 
COG category[I] Lipid transport and metabolism 
COG ID[COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
TIGRFAM ID[TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCC GAATAGGCCA TGGTTTTGAT GTCCATAAAT TTGGTGAACC ACGCCCGTTA 
ATTTTATGTG GCGTCGAAGT ACCCTACGAA ACTGGCTTGG TGGCCCACTC CGATGGTGAC 
GTGGTGTTAC ATGCCATATC CGACGCCATT TTAGGCGCGA TGGCGCTGGG TGACATTGGC 
AAACATTTCC CCGATACCGA TGCAGCCTAT AAGGGCGCAG ATAGTCGAGT CTTGCTTCGC 
CACTGCTATG CGTTAGCAAA GGCGAAGGGA TTTGAGCTGG GCAATCTGGA TGTCACTATC 
ATTGCGCAGG CGCCTAAAAT GGCGCCGCAT ATCGAGGATA TGCGCCAAGT GCTAGCAGCC 
GATCTCAATG CTGATGTTGC TGACATTAAT GTGAAGGCCA CTACCACTGA GAAACTCGGG 
TTTACGGGCC GAAAAGAAGG CATTGCAGTC GAAGCTGTCG TATTACTCAG CCGCCAATAG
 
Protein sequence
MKIRIGHGFD VHKFGEPRPL ILCGVEVPYE TGLVAHSDGD VVLHAISDAI LGAMALGDIG 
KHFPDTDAAY KGADSRVLLR HCYALAKAKG FELGNLDVTI IAQAPKMAPH IEDMRQVLAA 
DLNADVADIN VKATTTEKLG FTGRKEGIAV EAVVLLSRQ