Gene SO_3421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3421 
Symbol 
ID1171096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3560585 
End bp3561277 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content44% 
IMG OID637345222 
Productb-type cytochrome, putative 
Protein accessionNP_718974 
Protein GI24374931 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACCG AACATATCAA GGTTAGAGTC TGGGATTTAT CCACGCGCTT TTTTCATTGG 
GCCATGGTGG CGCTGATGGC ATTACTATGG TGGAGTGCCG ATGCGGGAGA AATGCAATGG 
CATCAGATTT TTGCTTACAG TCTGTTAATC TTGATTGGTT TTCGGCTGTT ATGGGGCTTG 
TTCGGCAGTG ATACCGCTAA ATTCAGCCAT TTTGTTCATC ATCCCAAGGT CGTGCTCGCC 
TATTTGAAAG ATGTGCGTTC AAAAGGGTTA TCTGTGGTAC TAGGGCATAA TCCGATGGGC 
GGATACATGG TCATAGCGCT GATTACTATT ATTAGTCTGC AGTTAGTCAC GGGATTATTT 
GTAACTGATG ATGTGTTTAC TGAGGGCCCT TTATATAGCT ACGTTAGCTC CGATACCAGT 
ACTTTCCTGA CTTGGCTGCA TAAGATGAAT TTTAACGTGA TCCTACTACT GATTGTTGTG 
CATGTATTAG CTGTGGTTGT GCATGCGGTG AAAGGGGACA AGCTAGTTGG TGCAATGCTC 
AGTGGCTATA AGCGCATTCC TCAGCGCGAA AATGCTATTG CTGCTAAATC ACCGTTAGTT 
TTTAAGTCTC AATGGCTTGC GCTTATTATT GTGCTGATGC TCGCAGGTTT GGTTTTTGCC 
AATTTAATGT GGCCAATAGT GCAAGTGTTA TAG
 
Protein sequence
METEHIKVRV WDLSTRFFHW AMVALMALLW WSADAGEMQW HQIFAYSLLI LIGFRLLWGL 
FGSDTAKFSH FVHHPKVVLA YLKDVRSKGL SVVLGHNPMG GYMVIALITI ISLQLVTGLF 
VTDDVFTEGP LYSYVSSDTS TFLTWLHKMN FNVILLLIVV HVLAVVVHAV KGDKLVGAML 
SGYKRIPQRE NAIAAKSPLV FKSQWLALII VLMLAGLVFA NLMWPIVQVL