Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3404 |
Symbol | |
ID | 1171080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3542358 |
End bp | 3543926 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637345206 |
Product | methyl-accepting chemotaxis protein |
Protein accession | NP_718957 |
Protein GI | 24374914 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACAC ATTCAAAAAA AGGTGAAAAA CACCTATCTG AAAACGCGAT ACTTCTCTCT ACGACCGATC TGAAAGGAAA TATTAAGTAC GTTAATCAAA CCTTTTCGCA GATAAGTGAA TATAGCGTTG CTGAGTTGCA AGGGAGTCCA CACAATATCG TGCGCCATGA GGATATGCCT GCCGCTGCCT TTAAAATGCT TTGGGATAGA ATTAAAACTG GCAAACCTTG GATGGGGATC GTCAAAAATA AGACCAAAAA TGGTAGTTAC TATTGGGTAA ATGCCTATGT CGCGCCTGTG TATGAAGATG GTAAAATCCA TGAATATCAA TCAGTTCGTC GTCAGGCTAC TCCAGAGCAA ATCAGGGCAG CAGAAGAGGT TTATCTGGCA ATCAATCAAG GTAAACAAGC TAAGACATTA AAAAAAGACC GATTAGGATT TAGGGGGAAA ATCCTCACCG CTATGTTTGT TGCTATTGCT GCAACGGCAT CTCTGGCGTG TTATTCCCCC CTCTTAGCGG CTCTTGTGGG TGGTTTAATC GCTTGGTTTT TGTGGTACAA GCTGATGCAG CCTTTGCAGG CATTGGTTAG CGTTGCCACT AATATTATTG ATGATCCTGT GGCTATGGGG ATTTATACCG GCAGGCAGGA TGAAATCGGT AAAATTGATC TTGCTCTACG ATTTTTAATC TCTGAAATCG GTGGTGTCGT GGGCCGTATG GCGGATTCAG CCAGTGAAAT TCAAGAGCAG AGTGTGAATC TTAAACAAAC CATCACCAAT ACCTGGGAAC ATGCCGATAG TCAGAGCGCA CAAACCACAC AGGCTGCGAC GGCGATGGAG CAAATGAGTG CCAGTTTTGC TGAGGTGACG GATAATATCC ACCGCACTGC ATCTGAAATG GTCTCCAGCC ATGAAGCAGC GCAGCGCGGC CATTCACGGC TTGAAACTGT CATTGAGGCG ATTCACCAAC TGAGTGTACA GGTGAGCCAT TTTTCCGATG TGGTGCAAAC GATAGAGCAA GATAGCCAAG CAATTCATCA AGTATTAGAG GTTATCCGCG CTATTGCCGA CCAGACTAAC CTGTTGGCGC TCAATGCGGC GATTGAAGCG GCGCGGGCAG GGGAAAGTGG CCGGGGTTTT GCCGTGGTTG CCGACGAGGT GAGACAATTA TCGAGCCGCA CCAGCCAATC GACATCGCAA ATTGAGCTGA TTGTGAGTCG CTTTAGAGAC AGTACCCAAA GAGCGACCTC AACGATGACG GCTGGGCAAG AACAGGTTAA ACGCTCCGTT TCCTTAGCGC AGGATGCCAG CGTTGCTTTT GGTGAGCTAT TGTCCTCTAT CTCCCGAATC AATTCCTTAA GTGATGATAA TGCGGCGGCC ATGACCCAAC AGACAACTGT GGCGGCAGAG ATCAGCCGTG CAATCCATGT GATCAGCGAT TTAGCTCAAC AGAGTCTACA GCAGACTCAA GATGCCGCGG CAAGGGGTGA GCAGGTATCA CGTTTGTCTA CCAAAACTCA TCACCTCTCG CAGCAGTTCT GGCAGCAGAG CGTACAGCGT AAGTATTAA
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Protein sequence | MQTHSKKGEK HLSENAILLS TTDLKGNIKY VNQTFSQISE YSVAELQGSP HNIVRHEDMP AAAFKMLWDR IKTGKPWMGI VKNKTKNGSY YWVNAYVAPV YEDGKIHEYQ SVRRQATPEQ IRAAEEVYLA INQGKQAKTL KKDRLGFRGK ILTAMFVAIA ATASLACYSP LLAALVGGLI AWFLWYKLMQ PLQALVSVAT NIIDDPVAMG IYTGRQDEIG KIDLALRFLI SEIGGVVGRM ADSASEIQEQ SVNLKQTITN TWEHADSQSA QTTQAATAME QMSASFAEVT DNIHRTASEM VSSHEAAQRG HSRLETVIEA IHQLSVQVSH FSDVVQTIEQ DSQAIHQVLE VIRAIADQTN LLALNAAIEA ARAGESGRGF AVVADEVRQL SSRTSQSTSQ IELIVSRFRD STQRATSTMT AGQEQVKRSV SLAQDASVAF GELLSSISRI NSLSDDNAAA MTQQTTVAAE ISRAIHVISD LAQQSLQQTQ DAAARGEQVS RLSTKTHHLS QQFWQQSVQR KY
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