Gene SO_3393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3393 
Symbol 
ID1171071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp3534653 
End bp3535234 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content44% 
IMG OID637345198 
ProductTetR family transcriptional regulator 
Protein accessionNP_718947 
Protein GI24374904 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAAATG CAGAGTTTGA TAGGGCACAA GTGCTCAGAG GGGCAATGGC CGCCTTTATG 
CGAAAAGGAT ATACCAAAAC CAGCATGCAG GACCTTACCC AAGCCACCGG ACTGCACCCT 
GGGTCCATTT ACTGCGCCTT TAGTAATAAA CGTGGGTTGC TCATTGCCGC AATCGAGCAA 
TATCAACAGG ATAGAAACGA GCAGTTTAAG CTTATCTTCT CCAACACTCG ACCAGTGCTT 
AATAATTTAA AAAACTACTT AGACAATGTA GTCGTCGAAT GTATCAGTTG CGATAGCCAG 
CAAGCCTGTT TACTCACCAA GGCATTAAAT GAAATCGCAG AACAAGATGA TGAGATTCAA 
CATATTATCA GCCAGAATTT ACAGCTATGG CAGAACGCAC TCACCGCACA ATTTGAACTG 
GCAACATCTC AGGGGATATT GCAGGGAGAG CTCAATAGCG AGCAAAGAGC ACAATACCTA 
ATGATGGGCA TTTATGGCTT ACGAACCTTC GCTCACACTC ATCCGCAGGC AGAGATATTG 
CAACAATTAG CCAACAAACT GTTTGATGAT GTTTGCAGAT AA
 
Protein sequence
MRNAEFDRAQ VLRGAMAAFM RKGYTKTSMQ DLTQATGLHP GSIYCAFSNK RGLLIAAIEQ 
YQQDRNEQFK LIFSNTRPVL NNLKNYLDNV VVECISCDSQ QACLLTKALN EIAEQDDEIQ 
HIISQNLQLW QNALTAQFEL ATSQGILQGE LNSEQRAQYL MMGIYGLRTF AHTHPQAEIL 
QQLANKLFDD VCR