| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3384 |
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| Symbol | phrB |
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| ID | 1171062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3521990 |
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| End bp | 3523528 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637345189 |
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| Product | deoxyribodipyrimidine photolyase |
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| Protein accession | NP_718938 |
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| Protein GI | 24374895 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTTA ATCAAAACAG GTCGGGGAAA CATGCATTAA TGTGGTTTCG GCAAGATCTG
CGCCTTACCG ATAATCAAGC GTTTACGGCC GCCTGTGATT GGGTAAGGCA ACATCATGCC
GCCAAGCTTA AAGCGATTTA CATCGCCACC CCAAGTCAAT GGCATCAGCA TGATATCGCG
CCAATTCAAC TCGACTTTAT TCAGCGGCAT GTGAATCTAC TGGCCCAAGG ACTGGTGAGC
TTAGGGGTTG AATTTGAACT CATTCAACTC GATAGCTTTA GAGATATTCC CGCATTTTTA
ACGAGTTATT GTGAAGAGCA TAGTATTGGA CGGGTATTTG CAGGACAAGA ACCTGAGATC
AATGAGCAAA AGCGCGATCA AGCTTGTGTT GAAGCGGGAA TTCCTTTGTC ACTTAGTGAT
GAACATTGCT TATTACCACC GGGAACCGTG CTTAATTTAA GTGGTGACAT GTATCGGGTG
TTCACTCCTT TTAGTCGCAA GTGGCGAGAG GTTGCCGCAA AACAGGCCAT TTTGCCGCTA
GGTGTGCCCG CGCCGCTAGG CTCTATCTTG TCTGAGCCTA AGCCATTATT TTTTAAAAAT
ATCGGGTCGA CTTATTTAGC TGCGAGTAAG GACATTGCGT CATCTAAAAA AGGCTTCAAT
CAAACCGCAC CAAATCCGCT TATCTCGAGT GAGCAGTGGG CGGCAGGTGA AGGGCAAGCC
AAGCGGCTGC TTAATCAATT TATTCAGCAA AAAGTGCAAG ACTATAAGCA AGATAGAGAT
TTCCCCGCCA TTGATGGCAC CAGTGTTATC TCCCCTTATT TGGCGATTGG CGTACTCAGC
CCAAGGCAAT GTGTCGCGGC GCTATTACAA CGTTTCCCTG AAGTCATTGT TGATGACACA
AGCCCAGGGC GAACATGGCT AAATGAGCTG ATTTGGCGGG AGTTCTACCG TCATTTGCTG
GTGGCTTTTC CTGATTTATC AAAGGGAAAC AACTTTAATC GCCAAGCCGA TCATGTGCTG
TGGCGTAATA ATCAAAGTGA GTTTTTAGCT TGGTGTGAGG GCAAAACAGG CTATCCGATA
GTGGATGCGG CCATGCGGCA ACTTAATCAA ACGGGCTGGA TGCATAATCG TCTGCGTATG
GTGGTGGCGA GCTTTTTAAC CAAACACTTG CTTATTGATT GGCGTTGGGG GGAGCGGTAT
TTCCGCCAGC ATCTTATCGA CGGCGATCTG GCGGCTAACA ACGGTGGCTG GCAGTGGTCA
GCTGGATGCG GTTGTGATGC GCAGCCGTAC TTTCGGATTT TTAATCCTAT GAGCCAGAGC
GAAAAGTTTG ATCCAGATGG CCGCTTTATT CGTAAGTACT TACCAGAACT CGCATCTTGG
GGCGTGACGC GATTGCACCA ACCCAATCAG CAAAAAATGC CTTCGTTGTT TGAAGCACCG
TTATTTGCAT CGCAAGCGGA TTATCCCAAT GCGATTGTTG AGCACAATGC AGCAAGGGCA
AGGGCGCTGA CGGTACTAGG TGTGCTGAAA AAGGCTTAG
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| Protein sequence | MSVNQNRSGK HALMWFRQDL RLTDNQAFTA ACDWVRQHHA AKLKAIYIAT PSQWHQHDIA
PIQLDFIQRH VNLLAQGLVS LGVEFELIQL DSFRDIPAFL TSYCEEHSIG RVFAGQEPEI
NEQKRDQACV EAGIPLSLSD EHCLLPPGTV LNLSGDMYRV FTPFSRKWRE VAAKQAILPL
GVPAPLGSIL SEPKPLFFKN IGSTYLAASK DIASSKKGFN QTAPNPLISS EQWAAGEGQA
KRLLNQFIQQ KVQDYKQDRD FPAIDGTSVI SPYLAIGVLS PRQCVAALLQ RFPEVIVDDT
SPGRTWLNEL IWREFYRHLL VAFPDLSKGN NFNRQADHVL WRNNQSEFLA WCEGKTGYPI
VDAAMRQLNQ TGWMHNRLRM VVASFLTKHL LIDWRWGERY FRQHLIDGDL AANNGGWQWS
AGCGCDAQPY FRIFNPMSQS EKFDPDGRFI RKYLPELASW GVTRLHQPNQ QKMPSLFEAP
LFASQADYPN AIVEHNAARA RALTVLGVLK KA
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