Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3363 |
Symbol | |
ID | 1171043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3506060 |
End bp | 3506998 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637345166 |
Product | LysR family transcriptional regulator |
Protein accession | NP_718917 |
Protein GI | 24374874 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTAGAAC TATTAGAACC TATTGCGATT TTTACTCATG TGGCCAGAGC CGGAAGTTTT AGTGCCGCCG CAAGAAGGCT TGGGATCTCT AAATCTAAGG TCAGTACGCA GGTAGCCGAT CTCGAGCATC GACTTGGCGT TCAATTGATC CAGCGTACAA CTCGTAGCTT AAGCCTGACC GAAGCTGGAC ATTTGTTATA TCTGCAAGGT GAGGAGTTGC TCCGCGATGC CGAGCAAGCG ATTGCCAGTG TGCATAACTT AAACGATGCA ACCCGTGGCG TCCTAAAAGT GGGGATTTCC CAATCCTTTG GTGCTATGCA TATTATCCCA GCCTTACCCT CCTTTATGGC AAAACACCCT GAGCTTGAGC TACAAGTCAG TTTGCTTGAT CATAAGGTTG ATGTGGTCAG TGAAGGTTTA GATTTGTTGC TAACTATGTC TGAGCAGTTA CCGCTAGGTA TGGTTGCACG TCCTTTGATG AAGTGTCAGT TTTTACTCGT TGCTTCACCC GATTATATTG CTAAGCATGG CGAACCGTCG CGCCCTGAAC AATTGGTTGA CCATAACTGT TTGGTCTATC AAGGTGAGTG GCATGAACAC AGCATGTGGC AATTTAAGAA AGGCGATGAT TACTGTGAGA TTGGTGTCTC GGGTAACTTT AGAGTGGATA ACGCACCAGC GTTAAAATCT GCCGCAATCA GTGGCTTAGG GGTTGTTTAC CTCGCTAGCT ATTTGATGGA AGATGAGATC GCCAAGGGAA CTTTAGTACC ACTGCTTAAA GATTGGCAAT TGACCCATCA TCTACCGCTA CAGGCGGTGT ATCCACGTCG TAAGCATTTA GCGCCTAAGG TCAGCGCCTT TATCGAGTTT ATTAAAGACC ATATCGGCAA CCCGCCTTAT TGGGATATCC CTTATGCTGA GCTTTTCAGT GAACGTTAG
|
Protein sequence | MLELLEPIAI FTHVARAGSF SAAARRLGIS KSKVSTQVAD LEHRLGVQLI QRTTRSLSLT EAGHLLYLQG EELLRDAEQA IASVHNLNDA TRGVLKVGIS QSFGAMHIIP ALPSFMAKHP ELELQVSLLD HKVDVVSEGL DLLLTMSEQL PLGMVARPLM KCQFLLVASP DYIAKHGEPS RPEQLVDHNC LVYQGEWHEH SMWQFKKGDD YCEIGVSGNF RVDNAPALKS AAISGLGVVY LASYLMEDEI AKGTLVPLLK DWQLTHHLPL QAVYPRRKHL APKVSAFIEF IKDHIGNPPY WDIPYAELFS ER
|
| |