Gene SO_3345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3345 
Symbol 
ID1171027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3491367 
End bp3491696 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content46% 
IMG OID637345150 
Producttranslation initiation factor Sui1 
Protein accessionNP_718899 
Protein GI24374856 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins 
TIGRFAM ID[TIGR01158] translation initation factor SUI1, putative, prokaryotic 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGTAG ATCCCAACGT TTCCCTAGTG TACAGCACAG ATAAAGGCCG TATTACAGCT 
GAGCCTGAGG CAAAAGCGAT CCCCACATCC GATGGCATCG TACGTATCCA TAGAGATAGC
AAAGGTCGTA AAGGCAAAGG CGTCTCTGTC ATTTCAGGCC TTGGGCTTGA CGAAGCAGGC
TTAAAAGCGC TAGCGCAAAC CCTTAAAAAA CAATGTGGTT GTGGCGGTAC AGTTAAGGAT
TTCACCATCG AAGTGCAAAC CGATAATCGT GAACAACTCA AACAGCTGCT TGAAAAACAA
AACTACAAAG TCAAATTGGC TGGTGGTTGA
 
Protein sequence
MRVDPNVSLV YSTDKGRITA EPEAKAIPTS DGIVRIHRDS KGRKGKGVSV ISGLGLDEAG 
LKALAQTLKK QCGCGGTVKD FTIEVQTDNR EQLKQLLEKQ NYKVKLAGG