| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3340 |
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| Symbol | |
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| ID | 1171022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 3487598 |
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| End bp | 3488425 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637345145 |
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| Product | small-conductance mechanosensitive channel |
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| Protein accession | NP_718894 |
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| Protein GI | 24374851 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACC TTGAAGGCTT ATTAAAGCAG GCTCCAGATC TTATCATGAC CTATGGTCTG
AAGATCTTAT TTGCCCTTGT CATTTTCTTT GTCGGTAAAT ATTTTGCCGG CGTTGCGCAA
AAGGTAGTGC ATAAGCTACT CAACAGTCGC AAAGTTGATC CAACCGTGGT CTCTTTTGTG
GCCAATTTAT CGTGGGCAGT TGTGTTTGTC TTCACCATTA TTGCCACCTT AGGTCAAATT
GGTGTGCAAA CGGCGTCTTT GGTTGCTGTA ATTGGTGCTG CTGGTTTGGC GGTAGGTTTA
GCACTGCAAG GCTCATTGTC TAACTTCGCT TCAGGCGTAT TAATGGTGTT ATTCCGCCCA
TGCCGCGTTG GCGATTATAT TGAAGCTGCA GGTATTGCTG GTACTGTTGA CGAAATCACC
ATTTTCTCAA CTAAATTACG TACACCAGAT AATAAAGTCA TCGTTGCACC TAACTCTTCA
ATCATGAATG GCACAATCAC CAACTACTCT GCATCTGAAA ATCGGCGCAT CGATTTAGTG
ATTTGTGTAT CTTATTCTGC AGATCTTGCC CAAACTAAAA AAGTATTAAC CGAGATTTTG
GACAACAACC AATACGTACT AAAAGAGCCA GGTTACACCG TGGGTCTTTC TGAATTGGCG
AGTTCTTCAA TTAACTTTGT GGTTCGTCCT TGGGTAAAAA CAGCGGATTA TTGGACGGCC
CGTTTCGAAA TTTTAGAGCA AATCAAAAAT GCGCTTGATG CAGCAGATAT TGAAATTCCG
TTTCCACAAA TGGATATCCA TGTGAAGCAA CTACCCGAGA GCAAATAA
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| Protein sequence | MENLEGLLKQ APDLIMTYGL KILFALVIFF VGKYFAGVAQ KVVHKLLNSR KVDPTVVSFV
ANLSWAVVFV FTIIATLGQI GVQTASLVAV IGAAGLAVGL ALQGSLSNFA SGVLMVLFRP
CRVGDYIEAA GIAGTVDEIT IFSTKLRTPD NKVIVAPNSS IMNGTITNYS ASENRRIDLV
ICVSYSADLA QTKKVLTEIL DNNQYVLKEP GYTVGLSELA SSSINFVVRP WVKTADYWTA
RFEILEQIKN ALDAADIEIP FPQMDIHVKQ LPESK
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