Gene SO_3305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3305 
Symbol 
ID1170991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3454571 
End bp3455191 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content37% 
IMG OID637345114 
ProductLuxR family DNA-binding response regulator 
Protein accessionNP_718859 
Protein GI24374816 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTGCCGA CTTTTCATGT CATGATTGCC GATGACCACC CTTTATACTT AGATGCTTTA 
GTCAATGGCC TTGTTTCCCA TCTCCCCGGT ACACAAGTTT CTCAGGCCAA TAATTATATT 
GAATTATTTG ATAGTCTTTA CCTGCAAGTG GAAGAGATCG ATTTGTTAAT CATGGATCTG 
TTCATGCCGG GAAGTAGCGG TTATGCAGGG TTGTCATTTT TGCGAACTCA GTTTCCAACA 
TTACCCATTG TTGTGATCAG TGCATTAGAT GATCTTATTG CCCGTAGCCA ATGTATTCAA 
CATGGGGCTG CATTTATTTC AAAATCTACG GCCCCTACTA ATATTTTTAA ACAGGTAGAG 
CAAATCCTTG ATGGTAGTTA TCAATTTCCC CTTACTCAAA TTAAATCATC TATAGAAACA 
ATCAATGCAA AAAAAATTAA AACACTAACC CCTAGTCAAT TCAGAGTGTT ACATTTAATC 
GCTGCGGGTC ATTCAAATAA GACTATAGCC GATAGTTTAA ATATCTCTGA AAAAACCGTA 
AAAGCACATA TCTCTGCTAT TTTTGAGAAG TTAGATGTCA AAAATAGAAC CCAAGCTGCA 
CTATTGCTTT CTGAAAGTTA A
 
Protein sequence
MLPTFHVMIA DDHPLYLDAL VNGLVSHLPG TQVSQANNYI ELFDSLYLQV EEIDLLIMDL 
FMPGSSGYAG LSFLRTQFPT LPIVVISALD DLIARSQCIQ HGAAFISKST APTNIFKQVE 
QILDGSYQFP LTQIKSSIET INAKKIKTLT PSQFRVLHLI AAGHSNKTIA DSLNISEKTV 
KAHISAIFEK LDVKNRTQAA LLLSES