| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3302 |
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| Symbol | |
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| ID | 1170989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3448058 |
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| End bp | 3451921 |
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| Gene Length | 3864 bp |
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| Protein Length | 1287 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637345112 |
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| Product | serine protease |
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| Protein accession | NP_718856 |
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| Protein GI | 24374813 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAATA AATCATTTAT CGCGATTGCC ATTGGACTTA CCGGCATATC TCAAGCGAGT
CAAGAAAATC TAAAAGCATA TAGTTGGCAG AATAAAGTTA ATTATGTCAT CAACGCTGAT
GCTGACGTTA GAGCTGATCA CTCTGGCCGT AGTCGTTACA TCATACAATT AATGCAAGCT
CCAGCTGCAA CACACGCTGC GCAATTATTT AATAAAGCAC CACAGGATAG GACGAGTGTT
AGTAAAGCAT CTATCACGCA GAAATTACCG CAAAAGATAA GTCATCTCCT ACAAACATCT
CAATTAGAAC AATATCGTCA AGAGATTGCT CATCATCAAG GTATATTTAA AACGACAGCG
AGTAAAACTC TTGGTCGGCC TTTGCAAGCA AAAATGCAGT TCGACACGGC CTTTAACGGT
ATGGTGTTAG AGTTAACGCC AGATGAAGCA AAAACAATGC TGACAGTACC ACAGGTATTG
AAGGTGATTA AAGAAACACC AACTGAACTC CAAACGGATA ATGGTCCGCA ACTTATTGGG
GCGAGTAATC TTTGGGATGG AAATGCGACG GGTCTCGCTG CAAAGGGGGA CGGGATAATC
ATTGGTATCT TAGATACAGG GATTAATACG GATAATCGTG CATTTTCTGC TGTCGGAGAC
GATGGCCACA ACATCATTAA TCCGCTCGGC TCTGGCAACT ATTTGGGCGA TTGTGTCAAA
GATGCCACCT TGTGTAATGA CAAACTGATA GGAGTATATA GTTTTCCTTT AGTTACGGAT
GAATATAATG GATTGCGTCC AGCAAATGGT GAAGATTATA ACGGTCACGG CAGTCATACC
GCTTCAACTG CTGCGGGAAA TGCATTAGTC AATGTACCTG TGTTAATGCC CAATATTGGT
GAGGAAGTGG GAGATGGGAT TGAAACTGGC ACAGTACTTT CTAATATCTC CGGTGTTGCC
CCGCACGCAA ACATCATTTC TTATCAAGTT TGCGACCAAT CAGGTTGTTA CCCGAGCCTG
ACGATAGCCT CTGTCGAGCT AGCGATAAAA GCAGGGGTAG ATGTGTTGAA CTACTCTATT
GGCCCCCGTG GAGGGGTTCA GAATGATCCC TGGAATACAG CATCGGATAT TGCTTTTTTG
TCTGCCCGTG AAGCTGGCAT TTTTGTGGCT ATGGCCGCTG GGAATGCGGG GCCTGATGCT
GAAACTGTTG GAAATGTGGC ACCTTGGGCG ATTTCAGTTG CCGCAAGTTC TCATCAAAGA
GTTTGGAGTC ATGTACTGAG TGGCTCCGGA GTGACTGGAG ATCCTCTACC CCAAATAGAA
GGTTTGGCTG ATGTATTTAC CAGTAATGGA GTGATCAATG CTCTCAGCGA TGAAACCGAA
ATAGTGTATG CAGGTGACTA CAAAGATATA AACGGCAATT CGCTTGCCCT ATGCAATAGT
CGAGTTTATT TTTTTGATCC TGTGATGGCA GATTTAAGAG GTAAAGTGGT TATATGTGAT
CGTGGTGAAA TTTCCTTAGC AGACAAAGTG ACGAATATGT TCTTTGCCGC TGGGGTCATC
ATACGTAATA CCCCTACTTC TAACCAGAAT ATGGCTAGCG CTCGTTATGC ATTGCCTTCA
TTACTCATCA ATGAGTTAGA TGGCAAACAG TTGTTGGAAT GGATGAAGCG CACTGACACT
CCTAAGGTGA GCATTAGTGC TGCAAATGCA GAGTATGATC AAGCTAATGC GGATATTTTA
GCGGACTTTT CATCAAGGGG GCCTTACAAA TGGCAAACTG AGTTGATGGT TCCACATATT
GCCGCACCAG GTGTTGATAT CTATGCTGCT TATGCGGATG AAATGCCATT TACTTCCGTT
AATGATGCAG CCCCTTCGGA TTTTGCCTTC TTAAGTGGCA CCTCTATGGC TTCTCCGCAT
GTTGCTGGTA GCGCAGCGTT ATTACGTCAA CTTCACCCAG ACTGGACTCC TGCTGAGATC
CAATCTGCAA TGATGCTGAC TGCAACGACT AATGTCTTAA AAGAGGATGG CAAAACGCCA
GCAGGTATTT TCGATATAGG CTCAGGTAGA CTTCAAATCG ATAAAGCCGC GCAGGCTGGA
CTCGTTATGG ATGTGCCTAT CGATGAGTAT AAGGCGGCAA ACCCAGAATT AGGCGGAGAT
GTGACATCAC TGAACCTGCC AGTGCTGACT TCAACTCAAT GCATGAACTC CTGCAGTTGG
ACTCGTACCT TACGTGCAAC ACGAGATGGC AGTTGGACTG TATCAAGTAA CGGTAATGTC
GATGGTGTCA CTATTTCTGC TTCCCCTTCG AGTTTTGATA TCAAAGAAGG GGAAAGTGTG
ACTGTTACTT TTACGGCAAA TATAGCGTTG CGTGCGAACG AGGATTGGAG CTTTATGCAA
GTCAATTTAG CTCCCTCTGA TAATTCACCA ATGTTATCTT TACCAGTAGC GGTAAAACCC
TTAATCGCAT TAGTTCCTGC ATTTATCACC CAAGATTATT TTTGGAATAA AGGTGACCTA
GAACTAGCCG ATTTTCACTT TCGTTATCCA GAAAATTTAC TTTTCAATAT AAAACCGCTG
GAGAAGGCAA CCTCTTATCA TTTAACGCTT GCTGCGGATT CTGATAATCG CTCACCGTTT
GATAACGTTA ATGACGGCAC CGCGCTAAGT TTTATAAATG TACCTGATGG TTCAAGCAAT
TTGCGTGTCA TTGTGGGGGA ATCAAGCGCA ATAGATATTG ATGTTTTTAT TGGGTTAGAC
AGTAATAACA ATGGCATACC TGAAATAGTG GAATTAACTC AGGCATGTGC CACAAGTATG
AATGTTGGCG AAGCTTGTCG TTTAAATGCG GGAAGTGGCC GTTATTGGGT ATTAGCACAT
AATTATAAAG GAAGTGGTGA TCCATTAGAC GCTGTTAGAC TTGACGTGCT GTTACAGCCA
AATACCGAGA CTTTGCCAGC ACTGGTAACC ATTCCAAATA TGTCCACAAA GCCATATGAC
GCATTAAGCG CTCATTTAAG CTGGAGTGGC GATATGATTG AAGGGGTTTA TTACAGTGAG
CTGGAAGTTT TTGACCGAAA TACACCAACA GCTGCACGAG CTATTGCTCG TAGTAACCTA
GTGGTTAATC GAGTAAAACC CTCAGTGAAA ATAGACTTAG TTAAAGGTGA CTTAAGTCAT
AGGAAAGAGG CTGAACTTAA TATCCAACTT CCGACTAACC CGACATCAGA TTCGCTAACC
TATACGCTTA ATTTAGCTAT GGCTGATAAT TTAACCATAA CGGATGTCGA AACGAATGGA
GACATAAGTT TAAATCATGA CAAAAATAAT ATTAAGGTGA CATTAGCGCC GGGTGAGACT
AGTACGCTTA TTGTTGCAAA AATCAATCAA AAATCCCCTA TAAGTGGTGA CTTTAAGGTT
GATTGGTCAC TCAATACGGA TAAATCAGAT TTTGATGTAC AGCAAGGCAG CTTGATGGTT
AGTAATACAA ATAAGGCACC AAGCCTTGCT GTTCCAAAAG AAATCAAAGG CAATATGGGG
AGTGATGTTA AATTCAACAT TGTGTCGGAG GATGCAAATC AAGATCCTCT GTCCTACACT
GTCACCCAGA TAAGTGGTCC GGCAGTGGAT ATTAAAGATG ACGGTAAAGG TGAGGTGATT
TTAAGTTTAC CTGAGGTGAA TTCAAGCCAA GTTGCAAAGT TCAACGTTAA TGTCACTGAT
GGCGAATTCA GTCAAAGCAG TGATATGTCA CTAGAGATAA CCTATATCAA TACTGAAAAT
AGCGGTGGGG CAATATTTTG GAGTATCGTC CTGCTAGGAC TCTTCGGCCT GCGCCGTAAA
CGTCTACGTA CTAGGTCATA CTAA
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| Protein sequence | MFNKSFIAIA IGLTGISQAS QENLKAYSWQ NKVNYVINAD ADVRADHSGR SRYIIQLMQA
PAATHAAQLF NKAPQDRTSV SKASITQKLP QKISHLLQTS QLEQYRQEIA HHQGIFKTTA
SKTLGRPLQA KMQFDTAFNG MVLELTPDEA KTMLTVPQVL KVIKETPTEL QTDNGPQLIG
ASNLWDGNAT GLAAKGDGII IGILDTGINT DNRAFSAVGD DGHNIINPLG SGNYLGDCVK
DATLCNDKLI GVYSFPLVTD EYNGLRPANG EDYNGHGSHT ASTAAGNALV NVPVLMPNIG
EEVGDGIETG TVLSNISGVA PHANIISYQV CDQSGCYPSL TIASVELAIK AGVDVLNYSI
GPRGGVQNDP WNTASDIAFL SAREAGIFVA MAAGNAGPDA ETVGNVAPWA ISVAASSHQR
VWSHVLSGSG VTGDPLPQIE GLADVFTSNG VINALSDETE IVYAGDYKDI NGNSLALCNS
RVYFFDPVMA DLRGKVVICD RGEISLADKV TNMFFAAGVI IRNTPTSNQN MASARYALPS
LLINELDGKQ LLEWMKRTDT PKVSISAANA EYDQANADIL ADFSSRGPYK WQTELMVPHI
AAPGVDIYAA YADEMPFTSV NDAAPSDFAF LSGTSMASPH VAGSAALLRQ LHPDWTPAEI
QSAMMLTATT NVLKEDGKTP AGIFDIGSGR LQIDKAAQAG LVMDVPIDEY KAANPELGGD
VTSLNLPVLT STQCMNSCSW TRTLRATRDG SWTVSSNGNV DGVTISASPS SFDIKEGESV
TVTFTANIAL RANEDWSFMQ VNLAPSDNSP MLSLPVAVKP LIALVPAFIT QDYFWNKGDL
ELADFHFRYP ENLLFNIKPL EKATSYHLTL AADSDNRSPF DNVNDGTALS FINVPDGSSN
LRVIVGESSA IDIDVFIGLD SNNNGIPEIV ELTQACATSM NVGEACRLNA GSGRYWVLAH
NYKGSGDPLD AVRLDVLLQP NTETLPALVT IPNMSTKPYD ALSAHLSWSG DMIEGVYYSE
LEVFDRNTPT AARAIARSNL VVNRVKPSVK IDLVKGDLSH RKEAELNIQL PTNPTSDSLT
YTLNLAMADN LTITDVETNG DISLNHDKNN IKVTLAPGET STLIVAKINQ KSPISGDFKV
DWSLNTDKSD FDVQQGSLMV SNTNKAPSLA VPKEIKGNMG SDVKFNIVSE DANQDPLSYT
VTQISGPAVD IKDDGKGEVI LSLPEVNSSQ VAKFNVNVTD GEFSQSSDMS LEITYINTEN
SGGAIFWSIV LLGLFGLRRK RLRTRSY
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