| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3286 |
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| Symbol | cydA |
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| ID | 1170976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3426141 |
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| End bp | 3427697 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637345099 |
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| Product | cytochrome d ubiquinol oxidase, subunit I |
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| Protein accession | NP_718840 |
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| Protein GI | 24374797 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGTTG AAGAGGTTGT TGAGCTATCG CGGCTACAGT TTGCGCTGAC AGCCATGTAT
CACTTCCTAT TTGTTCCCTT AACATTGGGG TTAGCATTTT TGCTAGCTAT CATGGTATCA
CTTTATGTGA TGACAGATAA ACACATTTAT AAAGATATGA CTAAGTTCTG GGGTAAGTTG
TTTGGTATCA ACTTTGCCTT GGGTGTTTCA ACAGGTTTAG CGATGGAATT CCAGTTTGGT
ACTAACTGGT CTTATTATTC GCATTATGTA GGTGACATTT TTGGTGCACC ACTGGCCATT
GAAGGTTTGA TGGCGTTCTT CCTTGAATCA ACCCTCGTGG GTATGTTCTT CTTTGGTTGG
GACCGTTTCA GCAAGCGCCA ACATTTGGCG GTCACTTGGC TGGTTGCGCT AGGTTCTAAC
CTATCTGCTC TGTGGATCCT GGTGGCAAAC GGTTGGATGC AAAACCCTGT TGGGTCAGTA
TTCAATTACG AAACCATGCG TATGGAAATG ACCAGCTTTG CCGAAGTCGT CTTTAACCCT
GTTGCACAGG TGAAGTTTGT TCACACTGTG GCTTCTGGTT ATGTCACTGG CGCAATGTTC
GTGTTAGCGA TCAGTTCTTA CTACATTCTG AAGAAACGTG ATTTACCTTT TGCACGTCGC
TCATTTGCGA TTGCTGCAAG CTTTGGTATG GCTGCTATCC TGTCAGTTAT CGTTCTGGGT
GACGAATCAG GCTACAAAGT GGGTGAGGCG CAACGCGTTA AATTAGCCGC GATTGAAGCT
GAGTGGCACA CTGAGCCGGC TCCTGCTGCC TTTACTGCGG TTGGTTTCCC TAATCAAGAA
ACCATGGAAA CTGACTTTGC AGTAAAAATT CCTTATGCGA TGGGTATCGT AGCAACGCGT
TCTTTAGATG AACAAGTAAC AGGTATTCAT GACTTAATTA GCGAGCACGA AGTGCGTATT
CGCAATGGTA TGAAAGCCTA TGCAATGCTA GTTAAACTGC GTGCTGGTGA TACCTCCCCT
GAATTACGCG CTGAATTTGA AGCGGCAAAA GTAGACTTAG GTTATGGCTT ACTGCTGAAG
CGTTATACCA ATAACGTGGT TGATGCGACT GAAGAGCAAA TTAAAGCTGC TGCTAAGGAT
TCTATCCCCA ATGTCGCGCC TATGTTCTGG AGCTTCCGTG TCATGGTTGG CCTAGGTTTT
GTCATGCTGT TCGTGTTCGC AGCGGCATTC TGGCAAAGCA CGCGTCACCA GATCGAAGAG
AATAAATGGG TACTTAAAGC GGCGCTCTTT AGCTTGCCAT TACCTTGGAT TGCGATTGAG
TGTGGTTGGT TTGTGGCTGA ATATGGCCGT CAACCTTGGA CCATCTCTGA GGTTCTGCCA
ACCTTTATGT CTGCGTCTAG CTTAACGACT GGCGATTTGT GGTTCAGTAT CATCTCGATT
TCACTGTTCT ACACTGTGCT GCTAGTGATC GAGATATTCT TGATGCTTAA GTTTGCCCGT
CTTGGACCCA GCAGTTTAAA GACTGGTCGT TATCACTTCG AGAAATTAGA AGCCTAA
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| Protein sequence | MIVEEVVELS RLQFALTAMY HFLFVPLTLG LAFLLAIMVS LYVMTDKHIY KDMTKFWGKL
FGINFALGVS TGLAMEFQFG TNWSYYSHYV GDIFGAPLAI EGLMAFFLES TLVGMFFFGW
DRFSKRQHLA VTWLVALGSN LSALWILVAN GWMQNPVGSV FNYETMRMEM TSFAEVVFNP
VAQVKFVHTV ASGYVTGAMF VLAISSYYIL KKRDLPFARR SFAIAASFGM AAILSVIVLG
DESGYKVGEA QRVKLAAIEA EWHTEPAPAA FTAVGFPNQE TMETDFAVKI PYAMGIVATR
SLDEQVTGIH DLISEHEVRI RNGMKAYAML VKLRAGDTSP ELRAEFEAAK VDLGYGLLLK
RYTNNVVDAT EEQIKAAAKD SIPNVAPMFW SFRVMVGLGF VMLFVFAAAF WQSTRHQIEE
NKWVLKAALF SLPLPWIAIE CGWFVAEYGR QPWTISEVLP TFMSASSLTT GDLWFSIISI
SLFYTVLLVI EIFLMLKFAR LGPSSLKTGR YHFEKLEA
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