| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3285 |
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| Symbol | cydB |
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| ID | 1170975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3424986 |
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| End bp | 3426125 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637345098 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | NP_718839 |
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| Protein GI | 24374796 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTGATT ATGAAATGTT GAGAGTAATC TGGTGGGCTC TGATCGGCGT ACTGTTCATC
GGATTTGCGG TCACAGACGG TTTTGATATG GGTGTAGGGG CGTTATTACC GATTATCGGT
AAAGACGATA CCGAGCGCCG TATCATGATC AATACGATTG CGCCCCATTG GGACGGCAAC
CAAGTGTGGT TGATTACCGC AGGTGGTGCC CTATTTGCCG CTTGGCCTAT GGTATATGCA
GTGTCTTTCT CTGGCTTCTA TGTCGCCATG ATGTTAGTGC TGTTTGCCCT TTACATGCGC
CCAGTGGGTT TCGATTACCG TTCTAAAATC GAAAATCCAA AGTGGCGTAA GTCATGGGAT
TGGGCTCTGT TTGTTGGCGG CTTTGTGCCA CCGCTGATCA TCGGTGTAGC CTTTGGTAAC
TTGTTGCAGG GTGTTCCATT CAATTTTGAT GAATTCCTGC GCGCGACCTA CCATGGCGGC
TTATTTGGCC TGTTAAACCC ATTTGGTTTA CTCGCAGGTT TAGTCAGCGT CACCATGTTT
ATGATGCAAG GCGCTGCATG GCTGCAAATG AAGACTGAAG GTGAGCTGCG TGTACGTGCT
GCCAATGCCA CTCAACTGTT TGCACTGTTA GTGGCCGTAT TATTTGCCGC TGCAGGTGTG
TGGTTAGCCA ATGGTATTGA TGGTTATGTA GTGACTTCAG CCCTTGACCA TAATGCAGTG
TCTAACCCAA CGTTGAAAAC CGTTGCGGTT GAAGCAGGTG CATGGTTAGC CAACTATGAC
AAGTATCCTA TTACCATGCT GTTCCCTGTA TTAGGTGTAG CATTACCACT ATTAGTGATT
GTTGTAAGCC GCTTAAATCG CTCTGGTTTT GCCTTCCTGT TCAGCTCGTT AGCTGTAGCA
ATGGTGATCT TAACCTGTGG TGCAGCAATG TTCCCATTCG TTATGCCTTC ATCATTAGAC
CCTAACGTGA GTTTAACCAT GTGGGATGCG ACAGCGAGTG AAATGACCTT AACGGTAATG
ACATGGGCTG CGATTGTCTT TGTTCCCATA GTGTTAAGTT ACACAGTATG GACTTACTTC
AAAATGTTTG GCCGCTTAAG CCGCAAGCAT ATTGAAGATA ACAAAGCCTC ACTCTATTAG
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| Protein sequence | MFDYEMLRVI WWALIGVLFI GFAVTDGFDM GVGALLPIIG KDDTERRIMI NTIAPHWDGN
QVWLITAGGA LFAAWPMVYA VSFSGFYVAM MLVLFALYMR PVGFDYRSKI ENPKWRKSWD
WALFVGGFVP PLIIGVAFGN LLQGVPFNFD EFLRATYHGG LFGLLNPFGL LAGLVSVTMF
MMQGAAWLQM KTEGELRVRA ANATQLFALL VAVLFAAAGV WLANGIDGYV VTSALDHNAV
SNPTLKTVAV EAGAWLANYD KYPITMLFPV LGVALPLLVI VVSRLNRSGF AFLFSSLAVA
MVILTCGAAM FPFVMPSSLD PNVSLTMWDA TASEMTLTVM TWAAIVFVPI VLSYTVWTYF
KMFGRLSRKH IEDNKASLY
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