Gene SO_3252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3252 
SymbolcheV-3 
ID1170945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3389778 
End bp3390698 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content42% 
IMG OID637345067 
Productchemotaxis protein CheV 
Protein accessionNP_718806 
Protein GI24374763 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAGTA TTCTTGATTC AGTCAACAAA CGCACCCAAC TCGTAGGTCA AAACCGACTA 
GAACTGTTGC TATTTAAGTT AAACGGTCGT CAACGGTTTG GGATAAACGT ATTTAAAGTG 
AAAGAAGTTT TGCAATGCCC ACCGTTAACG ACATTGCCTA AACTGAATCC TTACGTCAAA 
GGTGTTGCTC ATATTCGCGG TACCACTATT TCTGTGATCG ATCTGAGTGC TGCAACTGGA 
GGGCGTCCGC TAGCGAGCAC TGAAAATTGC TTTATCATCA TTTCGGAATA TAACCGTAGT 
GTGCAAGGTT TCCTTGTCAG TTCTGTGGAA CGTATTATCA ACATGAACTG GGAAGCCATT 
ATGCCACCAC CACAAGGTGC TGGCCGTTAT TCTTATTTAA CCGCGGTTAC CGAGATAGAA 
GGTGAATTGG TCGAAATTCT GGATGTTGAA AAGATTTTAG ATGAAATCTC TCCAGTAAAA 
ACGGCTATTA GTGAAGAGGT CAACCAACAG CTCACCATTG ATAGAACCCA GCATTACCAT 
ATTATGGTCA TTGATGACTC TGCGGTAGCT CGTAAACAGA TTATCCGTTC GCTAGAGTCG 
TTAAATCTAC AAATTGATAC GGCAAAAGAT GGCCGAGAGG CGCTTGATAA ACTCAAGGCA 
ATTGCAAGCG AAATGAATAA TGTCGCTGAT GAGATCCCGT TAATTATCTC CGATATTGAG 
ATGCCAGAAA TGGATGGTTA CACCTTAACA GCTGAGATCC GCGATGATCC TAAGCTGAAA 
AATATTAAGG TGGTACTGCA TACTTCATTA AGTGGAGTCT TTAACCAAGC CATGGTACAA 
AAGGTCGGGG CCAATGACTT TATCGCAAAA TTCAACCCTG ATGAATTAGC TGCGGCAGTG 
AACAAGCATT TAAGTTTGTA G
 
Protein sequence
MSSILDSVNK RTQLVGQNRL ELLLFKLNGR QRFGINVFKV KEVLQCPPLT TLPKLNPYVK 
GVAHIRGTTI SVIDLSAATG GRPLASTENC FIIISEYNRS VQGFLVSSVE RIINMNWEAI 
MPPPQGAGRY SYLTAVTEIE GELVEILDVE KILDEISPVK TAISEEVNQQ LTIDRTQHYH 
IMVIDDSAVA RKQIIRSLES LNLQIDTAKD GREALDKLKA IASEMNNVAD EIPLIISDIE 
MPEMDGYTLT AEIRDDPKLK NIKVVLHTSL SGVFNQAMVQ KVGANDFIAK FNPDELAAAV 
NKHLSL