Gene SO_3241 details

Gene Information

• Locus tag: SO_3241
• Symbol: flgJ
• ID: 1170935
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 3380959
• End bp: 3382113
• Gene Length: 1155 bp
• Protein Length: 384 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637345057
• Product: flagellar rod assembly protein/muramidase FlgJ
• Protein accession: NP_718795
• Protein GI: 24374752
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1705] Muramidase (flagellum-specific)
• TIGRFAM ID: [TIGR02541] flagellar rod assembly protein/muramidase FlgJ

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAGC TTTCAAGTTC ATCACATTTT CTTGATCTGG GCGGGCTGGA TAACCTGCGT 
GCCCAGGCTC AGAAAGATGA AAAGGGCGCC TTGAAAAAAG TCGCCCAACA ATTTGAAGGC 
GTTTTTGTGC AAATGCTAAT GAAGAGCATG CGTGACGCAA ATGCGGTGTT CGAGTCCGAT 
AGTCCTCTCA ATAGCCAATA CACCAAGTTT TATGAGCAGA TGCGGGATCA GCAGTTATCC 
GTCGATTTAT CGGATAAAGG CGTATTGGGA CTGGCGGACA TGATGGTGCA GCAGTTATCA 
CCTGAGTCTA GCCCGTTTAC ACCGGCATCT GTGCTGCGTA ATGACGGTGG CATGAAATTG 
GAACATGACG CTAAAGCGCT CAATATTCCT ACTCAAACGC CATCTACCGC AGAGGCTGAA 
AGTGCTAACA CTCCCGTGGT TGTAGCGCAT GGTGTGCCAG CATCAATTGC CCGCCCAAGT 
GTTGAATTTG AAGACAACAA TGGCGTCACC TCTTCACTCG ACATTGATAG GCCTCAGCGC 
TTACTGGCCA TCGATACGCC TAAGCCTACT TGGTCTGAGC AACCCTTATC AGCGATAGAA 
CCTGTCATCA GCGGCCAAAT ATTGCCGACT GTGGCATTTA GAGAAACGCA AAAGACGCTC 
AAGTTTGGTA GCCGTGAAGA GTTTTTAGCG ACGCTATATC CCCATGCAGA AAAAGCCGCT 
AAAGCCCTTG GCACTAAACC CGAAGTGTTA TTAGCTCAAT CGGCCCTTGA GACTGGCTGG 
GGACAAAAAA TTGTCCGTGG CCATAATGGA GCCCCAAGCC ATAACTTGTT CAATATTAAA 
GCTGATCGTC GTTGGCAAGG TGATAAAGCT AACGTGAGTA CCTTGGAATT TGAGCAGGGT 
ATTGCCGTTA GACAAAAAGC CGATTTCCGT GTTTACAACG ATTTTGACCA CAGTTTTAAC 
GATTTTGTTT CCTTTATTGC TGACGGTGAG CGCTATCAAG ATGCCAAGAA AGTGGCGGCT 
TCACCGACTC AGTTTATCCG TGCATTACAG GAAGCGGGTT ATGCAACCGA TCCTAAATAT 
GCTGAAAAAG TGATTAAAGT CATGCAGTCA ATCAGTGAAG AGCTGAAGTC GATACTGCCA 
GGAGAAGACA AATGA 

 

Protein sequence

MEKLSSSSHF LDLGGLDNLR AQAQKDEKGA LKKVAQQFEG VFVQMLMKSM RDANAVFESD 
SPLNSQYTKF YEQMRDQQLS VDLSDKGVLG LADMMVQQLS PESSPFTPAS VLRNDGGMKL 
EHDAKALNIP TQTPSTAEAE SANTPVVVAH GVPASIARPS VEFEDNNGVT SSLDIDRPQR 
LLAIDTPKPT WSEQPLSAIE PVISGQILPT VAFRETQKTL KFGSREEFLA TLYPHAEKAA 
KALGTKPEVL LAQSALETGW GQKIVRGHNG APSHNLFNIK ADRRWQGDKA NVSTLEFEQG 
IAVRQKADFR VYNDFDHSFN DFVSFIADGE RYQDAKKVAA SPTQFIRALQ EAGYATDPKY 
AEKVIKVMQS ISEELKSILP GEDK