Gene SO_3233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3233 
SymbolfliS 
ID1170925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3373086 
End bp3373496 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content39% 
IMG OID637345048 
Productflagellar protein FliS 
Protein accessionNP_718788 
Protein GI24374745 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1516] Flagellin-specific chaperone FliS 
TIGRFAM ID[TIGR00208] flagellar biosynthetic protein FliS 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGGAT CACTGCAATC ATATCGAAAG GTTTCGCTTG AAAGTGAAAT TACCGTGGCT 
TCCCCACATA GAATTATTCA GTTGATGTTT GCTGGTGCTC TGCAGCGCCT TGCGCAAAGC 
CGTTATGCCA TTGAGCAGAA TGATTTAGTC AATAAAGGGA TTTATATTAA TAAAGCGGTC 
GGTATCATTA TTGGACTGAG TAATAGTTTA AATATGGATG CTGGTGGCCA GATAGCTAAA 
AATTTGAGTG ACTTATACGA TTTTATGTTA CGTAAGATTT CTGAAGCTAA CCTAAATAAT 
GATGTAAAGG CCATTGATGA TGTTTGTGAT ATTTTACGAA CCATCAAAGA AGGTTGGGAC 
GCCATTCCCG CAGATAAACA CAATATCTCT TCCCATGTAG AAGCGCGCTA A
 
Protein sequence
MRGSLQSYRK VSLESEITVA SPHRIIQLMF AGALQRLAQS RYAIEQNDLV NKGIYINKAV 
GIIIGLSNSL NMDAGGQIAK NLSDLYDFML RKISEANLNN DVKAIDDVCD ILRTIKEGWD 
AIPADKHNIS SHVEAR