Gene SO_3226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3226 
SymbolfliH 
ID1170918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3364594 
End bp3365544 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content47% 
IMG OID637345041 
Productflagellar assembly protein H 
Protein accessionNP_718781 
Protein GI24374738 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1317] Flagellar biosynthesis/type III secretory pathway protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCCT CTAATCGGAG TGACAATCAG TTAGACGACA AATTATCCCA CAGGGTGGTT 
AGCGACGCTG AGATTGAGTT CAGCCATTGG CAATTACCCG ATGTGACTGA AACCGAAGAC
GTTAGCATTT CTAACCTGTT TGGTTATAGT GCCCAACAAG CACCAAAAGC TGTTGCCGTC
GAAACCGTTG CACCACCGAC AATGGCCGAA ATTGAAGATA TTCGTGCCCA AGCCGAAGAG
GAAGGCTTTA ACGAGGGTAA AACTCAAGGT CATATCGAAG GATTAGAGCA AGGTAGACTT
GAAGGGCTTG AACAAGGCCA TAAAGAAGGT TTCACTCAGG GGCATGAACA GGGCTTAGAA
ACGGGTCTTG CCGAAGCAAA AGCATTACTG AGCCGCTTTG AGGGGTTACT CTGTCAATTT
GAAAAGCCAC TGCAATTACT TGATGGCGAT ATTGAGCATA CCTTAATGTC GCTCACCATG
GCGCTGGCGA AATCGGTGAT TGGTCATGAG TTGAAGACCC ATCCGGAACA AATTTTGTCT
GCGCTGCGCT TGGGGGTCGA ATCTCTCCCG ATTAAGGAAC AAACTGTCAA TCTTCGTATG
CATCCCGACG ATGTGACATT GGTTGAAACC TTATATTCCA GTACTCAATT GACGCGTAAT
CAATGGCAAT TAGAGGCCGA TCCTAGCTTA ACGGCGGGGG ATTGTATTAT TAGCAGCCAA
CGCTCTTTGG TAGATTTAAC CCTTTCATCA CGCATTGATG CCGTGTTTGA ATCCCTTCGC
AATCAACAAT CTCACTTAGC GTTGCAGCAG CAACAGCGCC AAGCCGCCCT CGATGAGGAA
AATGCTGCTA AAATCGTCCC TGAGTCAATA AAGGACGCTG ATGAACTGGT CGCTCAGTAC
CAAGGGGATG GAGAGCAAGA TGCACAATCG CCGCCATCAA CTGCAGAATA A
 
Protein sequence
MSSSNRSDNQ LDDKLSHRVV SDAEIEFSHW QLPDVTETED VSISNLFGYS AQQAPKAVAV 
ETVAPPTMAE IEDIRAQAEE EGFNEGKTQG HIEGLEQGRL EGLEQGHKEG FTQGHEQGLE
TGLAEAKALL SRFEGLLCQF EKPLQLLDGD IEHTLMSLTM ALAKSVIGHE LKTHPEQILS
ALRLGVESLP IKEQTVNLRM HPDDVTLVET LYSSTQLTRN QWQLEADPSL TAGDCIISSQ
RSLVDLTLSS RIDAVFESLR NQQSHLALQQ QQRQAALDEE NAAKIVPESI KDADELVAQY
QGDGEQDAQS PPSTAE