| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3194 |
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| Symbol | |
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| ID | 1170887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3334737 |
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| End bp | 3335237 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637345010 |
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| Product | transcriptional activator rfaH, putative |
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| Protein accession | NP_718750 |
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| Protein GI | 24374707 |
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| COG category | [K] Transcription |
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| COG ID | [COG0250] Transcription antiterminator |
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| TIGRFAM ID | [TIGR01955] transcriptional activator RfaH |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTAG CAAAACCACA AGGGACAATG CTTGGCCATC CCAAGGGGCT GTTCCTTCTG
TTTACGACAG AACTCTGGGA ACGTTTTAGT TATTATGCAA TGCGTGCCAT TTTGGTGCTG
TATTTGGTGG ACCAAGTTGG CAAGCAAGGC GGAGGGTTAG GTTGGACCCA AGCCGACGCG
CTGTCACTCT ATGGTACCTT CACGGCTTTA GTTTACTTAA CTCCACTTAT CGGTGGCTGG
TTAGCTGATA ATTTTCTGGG TCAACGTAAA GCTATCTATT TTGGCGGCGC TTTAATGGCA
ACAGGCCAGT TTATGCTAGC CGCACCGCAT GCATGGTTTC CTGGTATTGA AACGACTGTT
TTCTATATCG GCTTAGGAAC ACTGATTTTG GGTAACGGTT TATTCAAACC AAATATCTCT
ACTATGGTGG GTGATCTGTA TGAGGAAGGT GACCATAGAC GCGATGGTGC GTTTACCATC
TTCTATATGG GGATTAACTT AGGAGCGGCA TTATCTGGCT TCGTTGTTGC TTGGGCCTAT
ACCAGCTTTG GTCATGCTGA AGTTATCAAT GGTAAAGAAG TATTTATCAA TAACTGGCAA
GCAGGTTTCT TCTGTGCCGG GATTGGTATG CTACTTTCCT TGGTTATCCA GTTTTTGTTT
GCACAAAAAT TACTGGGTGA TATTGGTACT GTGCCAGCGG CTAGGCTTGA GCGTGAGCGC
CAAGCTAAAT TAGGCAATGT TCGCAAAGAA CCCCTTACGA AAGTTGAACG TGACCGTATT
AAGGTCATCA TGGTACTTGG TTTGTTTACC ATCATCTTCT GGGCTGGTTT CGAACAAGCT
GGCGGCTTAA TGAATTTATT TACCAATGAA TTCACTGACC GTTACATTGG CACATGGGAA
GTACCAACAA CTTACTTCCA ATCACTTAAC GCCATTTTCA TTGTGTTATT TGCTCCTGTT
GTTGCCTCTA TTTGA
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| Protein sequence | MKAWYLLYCK PRSEVRAQQN LALQNLETYL PMVSEEKSQR GQKRICRVPL FPNYLFINFD
PSQTSVKQVH STRGVSRIVN CQEKMTPIDD RIIHAIRMKE LTPSQSVLDT PLELKTGEKI
RFKDGPFADL EAIFQEKCPN KRCHVLFNIM GQINILTVPE QSVERV
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