| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3193 |
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| Symbol | |
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| ID | 1170886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3331303 |
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| End bp | 3334068 |
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| Gene Length | 2766 bp |
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| Protein Length | 921 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637345009 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | NP_718749 |
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| Protein GI | 24374706 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTACAAC AACTTAAAAA ATACATCAAA GCGGCCAATC GAGTCGCGAT ATTCGCAGGC
ATGAGTGCTG CAATATTGAT GGGCGCTCAG GCGCAAGCCG TTACGCCCTC TCCGCAGATG
ATTGAACAAT TCAAACAATT ACCCAAAGCT GAACAACAGC GCTTAGCAAG ACAATACGGA
ATTGATCCCA GTATGATTTC CGGTAGTCAA GCACAGCCGC AGATAGCAAA TCCGCAGGTT
GTTTCTGAGC GTGACATGCA ATCTGAACGC TCCGATGCAA CAACCGATAA AAAAGAAAAG
GCAGAATTAG ATTTCTCTGT GGATTCTTCC AACCTCAAGC TTCGTCGTTT TGGTTATGAA
ATGTTTGCGG GTGAGCCAAG TACATTTGCA CCAGTGTCTG ATGTGCCTGT ACCTGGGGAA
TATCTTGTTG GTCCAGGCGA TAACATCAAA ATACAGCTTT ATGGGAAAGA GAATAAAGAA
TACGACCTAG TGATTAATCG CGAAGGAGTG ATTCAATTCC CTGAGTTAGG CCCTATCCCT
GTAAATGGTT TAACGTTTTC AGAGTTAAGA GAAACGCTGG CGCAGCGTAT TCAACAACAA
ATGATTGGAA TTGAGTCCAA TATCACCATG GGTGAATTGC GCTCTATTCG TATATTTGTG
GCGGGTGATG CTTACAAACC TGGTTCATAC ACCGTTTCTA GCTTATCGAC TATCACCCAA
GCGTTATTTG TTGCAGGTGG CGTTAACGAA ATCGGCTCAC TGCGTAATGT GCAATTGAAA
CGTAATGGCA AGCTTGTTGG CACCTTGGAC TTATATGACC TGCTGCTAAA AGGTGACGCA
TCAGGCGATC AACGCTTACG TTCTGGTGAT GTCGTCTTTA TTCCTTCAAT TGGTGGCCTC
GTTAGCGTTT CTGGCGAAGT AAGACGCCCA GCCATTTATG AGTTAAAAAA TAATGAATCC
ATGGCTGATG TTATTGCTAT GGCTGCGGGG TTAAATCCTG GCGCGTATCC AAAAAGCAGT
TCAGTCGAGC GTTATAACAG CAAATCGTTA AAAACAGTCA TCAACGTCGA CCTCACTAGC
GAACAGGGCA AAATGACATT GGCCAAGGCG GGTGATGTTA TTCATGTTAA AAACGCTTCT
GAGCAGTTTG AAAGTGCTGT AACTGTAGTC GGTGCCGTTG TGCGCCCTGG TAAATATCAA
TGGTTTGCGG GGCAAAAAAT CAGTGATGTT TTTCCCTCAA TTTGGGGTGA TTTAGCCATT
TCAGCTGATT TAGATTATGG CTTAGTGGTT CGCGAAGTGA ACCAATATGG TGATATTGAA
GTTCGTCAGT TTTCACCGGG TAAAGCGATT AGCAATAAAA ACAGTGACCA AGATATTGAG
CTAAAAGCCC GTGATAAAGT CATCGTGTTT AATTTTTCTG ACGATGTACA AAATCGTTTC
GAGCTGAATA AGTTAGTTAA ACAGCGCGTT GAGAAGGTGA CTTCCTTAAA TACCAATACG
CTGATCAGTT CTGATTTATT CAAAGCGGGA TTTGTCCAGC TTGATAAGAG CAGATTAACC
CAGCGTACAC AGTTGGCTGG TGTTGTTGTA ACCGACAAAA CCGAGTCAGA AGATGTTGCT
GTGGTTAAAG GTGTCGTCAA CAAAATGCTG GCGAATTTAT TTGATGATGC AGAGTTACTC
AAGCTGAGTA ATCAAATGGC ACGCCAAGAA TTGCTCTATC CGGTGATGGT TAAGCTTAAT
AATCAGGGCC GAGCAGGGGC AGGGATTCAA GTTGTCGGAG TCGATGGTCA GGTACGTTTA
CCAGGTCTTT ATCCACTAAC CTCTGGTGCG AAAGTTAATG ACTTAATTGT TGCGGCAGGC
GGCTTAAAAG AAGGCGCCTA CACAACCAGA GCCGAATTAA CATCAACGGT AGTTGATAAT
TCAGGCTCAA AAACTGAGCA CAAAAATATC GACCTTGCTC TAGCACTGCA AAATAACTCA
AGTGCCAATT TAATGTTATC CGGCAGAGAT ATTCTTACCG TGATGACCAC GCCTGATTGG
CAAGAGACCA AAGTGGTTGA GGTAAGAGGC GAGGTTAAAT TCCCTGGTCG TTACAATATT
CGCCGTGGTG AAACTTTAAG CGACTTAATC ACCCGAGTGG GTGGTTTTAC CGACTATGCT
GCATTACCTT CAGCAGTCTT TGTGCGTGAA TCTGTGCGTC AACAAGAACA GATTGAAATC
AAAAAGCTGG CAGACCAACT GCGTCGCGAT ATCGCTACCC GTGGGATTTC AAAGGATGGT
ACGGTGGTTA ATTATGCCGA TGCGCAATTA ATGCTAGCTG ACCTTGAAAA TATTAAAGCG
GTTGGCCGTT TAGTTGTCGA TTTACCCGCA ATTTCACTCG GTATTACTCA GGCGGATTTG
CAGTTAGAAG ATGCTGACAT TTTATATGTC CCTTCAACTA AGCAAACAAT TGCGGTAATG
GGTGAAGTTC AACATCCCGC CACCCACAGA TTTAAAGACG GATTAACGAT AGACCAGTAT
CTAGCAATGT CAGGCGGTGC AAGAGAGCGT GCTGATGCCG GTCGAACTTA CGTTATTCAA
GCAAATGGTT CGGTATTGAT GCCATCACGC TCAAGCTGGT TTAGCAGTGG TGAACAATTA
CAACCGGGTG ATACTGTGAT TGTGCCATTA GATACCGAAT ATAAAGATAA TCTAACTCTT
TGGACGCAAG TGACAGGCAT TATCTATAAC ACCGCTGTCG CTATCTCAGC CATCGCAGGC
TTGTAA
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| Protein sequence | MLQQLKKYIK AANRVAIFAG MSAAILMGAQ AQAVTPSPQM IEQFKQLPKA EQQRLARQYG
IDPSMISGSQ AQPQIANPQV VSERDMQSER SDATTDKKEK AELDFSVDSS NLKLRRFGYE
MFAGEPSTFA PVSDVPVPGE YLVGPGDNIK IQLYGKENKE YDLVINREGV IQFPELGPIP
VNGLTFSELR ETLAQRIQQQ MIGIESNITM GELRSIRIFV AGDAYKPGSY TVSSLSTITQ
ALFVAGGVNE IGSLRNVQLK RNGKLVGTLD LYDLLLKGDA SGDQRLRSGD VVFIPSIGGL
VSVSGEVRRP AIYELKNNES MADVIAMAAG LNPGAYPKSS SVERYNSKSL KTVINVDLTS
EQGKMTLAKA GDVIHVKNAS EQFESAVTVV GAVVRPGKYQ WFAGQKISDV FPSIWGDLAI
SADLDYGLVV REVNQYGDIE VRQFSPGKAI SNKNSDQDIE LKARDKVIVF NFSDDVQNRF
ELNKLVKQRV EKVTSLNTNT LISSDLFKAG FVQLDKSRLT QRTQLAGVVV TDKTESEDVA
VVKGVVNKML ANLFDDAELL KLSNQMARQE LLYPVMVKLN NQGRAGAGIQ VVGVDGQVRL
PGLYPLTSGA KVNDLIVAAG GLKEGAYTTR AELTSTVVDN SGSKTEHKNI DLALALQNNS
SANLMLSGRD ILTVMTTPDW QETKVVEVRG EVKFPGRYNI RRGETLSDLI TRVGGFTDYA
ALPSAVFVRE SVRQQEQIEI KKLADQLRRD IATRGISKDG TVVNYADAQL MLADLENIKA
VGRLVVDLPA ISLGITQADL QLEDADILYV PSTKQTIAVM GEVQHPATHR FKDGLTIDQY
LAMSGGARER ADAGRTYVIQ ANGSVLMPSR SSWFSSGEQL QPGDTVIVPL DTEYKDNLTL
WTQVTGIIYN TAVAISAIAG L
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