Gene SO_3172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3172 
Symbol 
ID1170866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3309691 
End bp3310248 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content39% 
IMG OID637344989 
Productgalactosyl transferase 
Protein accessionNP_718728 
Protein GI24374685 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGATTC GTTTAATTGA TTTTCTCGCA GCCTTCTTTG GGTTGTTATT GCTATGGCCA 
ATATTGCTCA TCGTCACCAT CATTGGTCTG TTTGATACTG GCTCACCGAT TTTTATTCAA 
ACTCGAGTAG GTAAACATAA AAAGCCATTT AACTTGGTTA AGTTTCGTAC TATGAGTAAG 
GATACCGCAT CGGTTGCTAG CCATCTTGCC AGTAATGCAG CTATCACAAA GTTTGGTGGT 
TTTTTGCGTA AAACTAAAAT AGATGAATTA CCACAACTGA TTAACGTACT TAAAGGTGAA 
ATGAGTTTGG TTGGCCCACG GCCTAACTTA TTTAATCAAG AAGAATTGAT CGCTGAACGT 
GATGCATTAG GTGTATATAA CGTTCTGCCT GGTGTTACAG GGTTAGCGCA AGTGCAAAAT 
ATTGATATGT CTACGCCTAA ATTGCTTGCT CAAACCGATA AGCAAATGAT CGATACCTTA 
ACATTGCGTA GTTATTTTAA ATACATTCTT ATGACGGCTA CAGGAAGTGG CAGCGGTGAT 
GCTGTTAAAC CAAGTTAG
 
Protein sequence
MLIRLIDFLA AFFGLLLLWP ILLIVTIIGL FDTGSPIFIQ TRVGKHKKPF NLVKFRTMSK 
DTASVASHLA SNAAITKFGG FLRKTKIDEL PQLINVLKGE MSLVGPRPNL FNQEELIAER 
DALGVYNVLP GVTGLAQVQN IDMSTPKLLA QTDKQMIDTL TLRSYFKYIL MTATGSGSGD 
AVKPS