| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3171 |
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| Symbol | |
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| ID | 1170865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3307620 |
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| End bp | 3309560 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637344988 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | NP_718727 |
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| Protein GI | 24374684 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTTT TGCATTTTTT ATTCTCATTA AAGCGGTCAC AGAAGCGTTT GGTCAGCGTA
GCGATAGACT CAGTTTTTTT GCTTTTTGCC TTTTGGTTTG CGTTGCTGGT GCGCTTGGAC
TCGGTAGATG TATTGTTTAA ATCGCAATAT TGGGGATTGA TTGTGTTAAC TATCCCTATG
AGTATTGCTG GGTTTATAAG GTTGGGGCTT TATCGCGCAG TGCTGCGTTA TATTGGCTCG
CAGGCATTTA CTGCAATCGT GGCTGGTGTC GGTATTTCTA CCATAGCTCT TGTTTTACTA
GCCTATTATG GCGGGGTGGA TTTACCTCGC ACAGTGCCAT TTATCTATGC TGCTTTTGCT
CTCGTTTTTG TGGGTGGCGC GCGCGCACTT ATGCGTTCAT TAGTCGGTGC AGGTATTAAC
CGCCGTGGTG AGCCAGTTAT TATTTACGGT GCGGGCGTGA GCGGACGGCA AACGGCGATT
GCACTTGCAC AAAGTCATGA ATACCATCCG GTTGCTTTTG TTGATGATGA CGAGAGTTTG
CACAATACAT CGATACAAGG CTTGCATGTT TATGCGTCGA ATCAATTAAG TAAGCTTATA
AAACAGCGAC CTACAACTCG TGTTTTGCTG GCAATGCCGA GTGCATCACG TTCACGTCGT
CAAGAAATTA TTAATCAACT TGAGCCGCTT ACTGTCAAGG TGATGACCTT GCCCGCCATG
GCGGACTTAG TGAGTGGTGA TAAGTTATTT AGTGATGTGA AAGAAGTCGA AATCGAAGAT
TTATTGGGTC GAGATTCTGT TGCGCCAAGA CAACATTTAT TGACTGCCAA TATTAAAAAC
AAAGTAGTTA TGGTTACTGG GGCTGGTGGT TCAATCGGTT CAGAGTTATG TCGCCAGATT
TTAAAACAGC TACCTAAGCA GTTAGTTTTA TTTGAGTTAT CGGAGTTCGC ACTTTATTCG
ATTGAGCGTG AACTTTCTGC GACTGCCACT GAGCTGGGTA TTGATGTTGA AATCGTCCCT
ATCATGGGCT CTGTACAACG TGAAAACCGT GTGCAAGCGG TGATGCAGGC GTTTAAAGTG
CAGACGGTTT ACCATGCCGC AGCCTATAAG CATGTGCCTT TAGTTGAGCA TAACGTGGTT
GAAGGTGTGC GCAATAACGT ATTTGGTACT TTATATACCG CGAGAGCGGC CATTGCGGCA
AAAGTAGAAA CCTTTGTTTT GGTTTCAACT GATAAAGCAG TACGCCCTAC AAATGTGATG
GGTACCACTA AACGTATGGC AGAACTGGCA TTGCAAGCAT TAGCAAAAGA GAACCATCAC
ACCCGTTTTT GCATGGTGCG TTTTGGTAAT GTGCTGGGGT CTTCTGGTTC GGTTGTGCCA
TTATTTCGTA AACAGATTGC TAACGGCGGC CCAGTTACTG TTACTCACCC TGAAATCACG
CGCTTTTTTA TGACAATCCC TGAAGCATCA CAGTTGGTTA TTCAAGCAGG TGCTATGGGT
AAGGGCGGTG ATGTCTTTGT GCTTGATATG GGTAAATCGG TCAAAATCAT TGATCTTGCA
GCGAAAATGA TCCGCTTAAG TGGTTATGAT GTGAAGGATG AAGCGAACCC TAACGGTGAT
ATCGCGATTG AATTTACTGG CCTTCGCCCC GGTGAAAAAC TGTATGAAGA GTTACTGATT
GGCGATGATG TAACTGGTAC AGACCATGAG CGAATTATGA CCGCGAATGA AATTTACCTG
CCATGGGTTG AATTAGAGTT AATTCTTAAT CGTTTGGATA AAGCATGCCA TGAGTTTAAC
CATGAGGCTA TTCGTGAGAT TTTACTTGCG GCGCCTACCG GATTTGCCCC AACTGACGGT
ATTTGTGATC TAGTTTGGCA GCAAAGGAAA TTATTTAAAC CAGCTGATAC AAAAGCGAAA
GTGGTGACGT TAGTATCTTG A
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| Protein sequence | MDFLHFLFSL KRSQKRLVSV AIDSVFLLFA FWFALLVRLD SVDVLFKSQY WGLIVLTIPM
SIAGFIRLGL YRAVLRYIGS QAFTAIVAGV GISTIALVLL AYYGGVDLPR TVPFIYAAFA
LVFVGGARAL MRSLVGAGIN RRGEPVIIYG AGVSGRQTAI ALAQSHEYHP VAFVDDDESL
HNTSIQGLHV YASNQLSKLI KQRPTTRVLL AMPSASRSRR QEIINQLEPL TVKVMTLPAM
ADLVSGDKLF SDVKEVEIED LLGRDSVAPR QHLLTANIKN KVVMVTGAGG SIGSELCRQI
LKQLPKQLVL FELSEFALYS IERELSATAT ELGIDVEIVP IMGSVQRENR VQAVMQAFKV
QTVYHAAAYK HVPLVEHNVV EGVRNNVFGT LYTARAAIAA KVETFVLVST DKAVRPTNVM
GTTKRMAELA LQALAKENHH TRFCMVRFGN VLGSSGSVVP LFRKQIANGG PVTVTHPEIT
RFFMTIPEAS QLVIQAGAMG KGGDVFVLDM GKSVKIIDLA AKMIRLSGYD VKDEANPNGD
IAIEFTGLRP GEKLYEELLI GDDVTGTDHE RIMTANEIYL PWVELELILN RLDKACHEFN
HEAIREILLA APTGFAPTDG ICDLVWQQRK LFKPADTKAK VVTLVS
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