| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3113 |
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| Symbol | tgt |
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| ID | 1170802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3241717 |
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| End bp | 3242841 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637344918 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | NP_718675 |
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| Protein GI | 24374632 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTTG AACTTGACAC TACCGACGGC CGTGCGCGCC GTGGCCGGTT GATTTTTGAT
CGTGGTACGG TAGAAACGCC AGCATTTATG CCCGTCGGGA CTTACGGTAC CGTGAAAGGC
ATGACGCCTG AAGAAGTTCG TGCGACTGGC GCCGATATTC TGCTCGGTAA CACCTTCCAT
TTATGGTTGC GTCCCGGCGA AGAAATCATG CGTAAGCACG GTGACCTGCA CGACTTTATG
AACTGGCAGC GTCCAATTCT CACCGATTCC GGCGGTTTTC AAGTGTTCAG CTTGGGTGAT
ATTCGTAAAA TTACCGAAGA AGGGGTGCAT TTCCGCTCGC CAATTAATGG TGAGAAAATC
TTCTTAGATC CTGAAAAATC AATGCAAATT CAACATGCGT TGGGCAGTGA TGTGGTGATG
ATTTTTGACG AATGTACCCC GTATCCAGCG ACAGAAGATG AAGCGCGCAA GTCAATGCAG
ATGTCACTGC GTTGGGCTAA GCGTTCACGC GACGAGTTCG ACCGTCTGGA AAACCCCAAT
TCATTATTTG GGATTATCCA AGGCAGTGTT TATGAAGATT TACGCGACGA AAGCTTAAAA
GGCTTAGTCG AAATTGGTTT CGACGGTTAT GCCGTCGGCG GTTTGGCCGT AGGTGAGCCT
AAGGAAGATA TGCATCGCAT TCTTGAGCAT GTCTGCCCAC AAATTCTTGC GGACAAGCCA
CGCTATCTGA TGGGGGTCGG TAAGCCAGAG GATTTAGTTG AAGGTGTGCG TCGTGGTATC
GATATGTTTG ACTGTGTGAT GCCAACCCGT AACGCCCGTA ACGGTCACCT GTTTACCAGT
GAAGGTGTGA TTAAGATCCG CAATGCGCGT CATCGTGATG ACACTTCACC ACTTGATCCT
AAGTGTGATT GTTATACCTG TAAAAACTAT TCACGGGCAT ACCTTTACCA CTTAGATCGT
TGTAATGAGA TTCTGGGTGC GCGTTTAAAC ACCATTCACA ACTTGAGATA CTATCAAATG
TTAATGGAAG GTTTGCGCGG TGCGATTGAG ACAGGTACAT TAGACGCCTT TGTGAAGGAC
TTCTATACCA GTCAAGGTCG TGAAGTACCA GAGTTAGTCG ATTGA
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| Protein sequence | MKFELDTTDG RARRGRLIFD RGTVETPAFM PVGTYGTVKG MTPEEVRATG ADILLGNTFH
LWLRPGEEIM RKHGDLHDFM NWQRPILTDS GGFQVFSLGD IRKITEEGVH FRSPINGEKI
FLDPEKSMQI QHALGSDVVM IFDECTPYPA TEDEARKSMQ MSLRWAKRSR DEFDRLENPN
SLFGIIQGSV YEDLRDESLK GLVEIGFDGY AVGGLAVGEP KEDMHRILEH VCPQILADKP
RYLMGVGKPE DLVEGVRRGI DMFDCVMPTR NARNGHLFTS EGVIKIRNAR HRDDTSPLDP
KCDCYTCKNY SRAYLYHLDR CNEILGARLN TIHNLRYYQM LMEGLRGAIE TGTLDAFVKD
FYTSQGREVP ELVD
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