Gene SO_3112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3112 
SymbolyajC 
ID1170801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3241358 
End bp3241690 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content43% 
IMG OID637344917 
Productpreprotein translocase subunit YajC 
Protein accessionNP_718674 
Protein GI24374631 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTATTT CAAATGCATA TGCAAATGCC GCTGGCACTC CACAGGGTGG TGGCACAATG 
GAATTGATTT TCATGCTGGT GATTTTCGGC CTGATTTTCT ATTTCATGAT TTTCCGTCCG
CAATCAAAGC GCGTTAAAGA GCACAAAAAT CTGATGTCAT CCCTCGGCAA AGGTGACGAA
GTCCTGACCA GCGGCGGTAT CTTAGGCAAG ATTGCAAAGA TCAGCGATGA CAATGACTAC
GTGTTACTGA GCTTGAATGA CACAACTCAA ATTACAATTA AAAAAGATTA CATTGCAGCT
GTATTGCCTA AGGGCTCTAT CCAGTCGTTG TAA
 
Protein sequence
MFISNAYANA AGTPQGGGTM ELIFMLVIFG LIFYFMIFRP QSKRVKEHKN LMSSLGKGDE 
VLTSGGILGK IAKISDDNDY VLLSLNDTTQ ITIKKDYIAA VLPKGSIQSL