Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3099 |
Symbol | |
ID | 1170788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 3225094 |
End bp | 3226416 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637344904 |
Product | long-chain fatty acid transport protein, putative |
Protein accession | NP_718661 |
Protein GI | 24374618 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2067] Long-chain fatty acid transport protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATCAT TCAACAAGAC GCTGCTTACT GTTGCCATCG CACTGGCTAG CTCACAAACT TTCGCTTCAG GTTTCCAATT AAACAGCCAA TCCGCCACGG GTATGGGTCG TGCTTTTGCA GGGGATGCGG TTATTGCCGA TAACGCCACT GTTTTGTCAC GTAACCCTGC TGCAATGGCA TTATTCGATA AAGATGCGAT TTCTTTCGGC TTAACCTATG CCGATATTAC CGTTGATGTT AAAGACGTTA ACTTTAACTT ACCTAATGGT GCCGTTGACT TAGGCAGCAT CGACGATGCG GGTAGCTCTA AAGTTATCCC TAATATTTTT TATATTCACC CAATCGACGA TAAATTCGCC GTCGGTTTTG CAGCCTTCTC TAACTTTGGA ACTGGTACCG ATGCCAGCTC ACTGTCTAAG AATTTACCAA AAGGCTCACC AGCACCTTAT GATCTGCTTG GCGAAACAGA AGTAACCACG GTTAACTTTA ACGCCAGCGT GTCTTATCGC ATCAATGATA TATTCAGCAT CGGTGCAGGT GTAGATGCCA TCTACGGTGA AGGTCGTTTA ACCCGTAACG CAAGCACTAC ACCTCTCGTT GATGTGGATG CTGACGGCTG GGCCTTCGGT GGTATCTTGG GTGCCACAGT TGAGTTAGAT AAAGATAACC GCTTCGGTAT CAGCTACCGT TTCAGCCCGA CAGTGAATGT TGAAGGGGAT ATTAACACCA TCAGCACTAA AGACTTATCT GCTGCTGGCT TAGGTTCAAA AACAGCCCTA GCAACAAACT TTGACAGCTT AGATGTACCA CTTGCAGATA TTTTCCAAGT TGCAGGCTTC CATCAAATCA CGCCTAAGTT TGCGCTGCAC TATACTGCGC AATACACCCA GTGGAGCAAA TTCGACCAAA TCACGGCTAA AGATGGCGTA GCGACGATTA TCCCAGGTCA AGCGGGTGCT GGTATCAAGC TTCCAGCAGG TGATATCGCC CTTAAAGAAT ACCAATGGAA AGATTCATGG TTATTCAGCC TAGGTGGCAC TTACACCATT AACGAACAAT TTACTGTTCG TGCAGGTTAT ATGCATGACC AAGGCGTTGT GGACGAAATT AGCTCAATTT CATTCCCTGA CTCAGATCGC AACTGGTACA CAGCAGGTAT GAGCTATCAT ATCAACCCAC AAAACACCGT TGACTTTGGT ATCGCCTTTA TCAAAGGTGA AGAAGTGCAC TTGATCGAAA ACAGTGCCAT TACAGGTCCT GTAAACGCGA TAACTGAATC AAGCGGTATG TACTACTCTG TACAGTACAG CTACCAGTTC TAA
|
Protein sequence | MKSFNKTLLT VAIALASSQT FASGFQLNSQ SATGMGRAFA GDAVIADNAT VLSRNPAAMA LFDKDAISFG LTYADITVDV KDVNFNLPNG AVDLGSIDDA GSSKVIPNIF YIHPIDDKFA VGFAAFSNFG TGTDASSLSK NLPKGSPAPY DLLGETEVTT VNFNASVSYR INDIFSIGAG VDAIYGEGRL TRNASTTPLV DVDADGWAFG GILGATVELD KDNRFGISYR FSPTVNVEGD INTISTKDLS AAGLGSKTAL ATNFDSLDVP LADIFQVAGF HQITPKFALH YTAQYTQWSK FDQITAKDGV ATIIPGQAGA GIKLPAGDIA LKEYQWKDSW LFSLGGTYTI NEQFTVRAGY MHDQGVVDEI SSISFPDSDR NWYTAGMSYH INPQNTVDFG IAFIKGEEVH LIENSAITGP VNAITESSGM YYSVQYSYQF
|
| |