Gene SO_3072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3072 
SymbolfabB 
ID1170758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3191404 
End bp3192615 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content48% 
IMG OID637344876 
Product3-oxoacyl-(acyl-carrier-protein) synthase I 
Protein accessionNP_718636 
Protein GI24374593 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAG TCGTGATCAC CGGAATGGGT GTTGTTTCAA GTATCGGTAA TAACAAGCAA 
GAAGTGACAG AGTCACTTAA AGCGGGCCGT AGTGGTATTA CACATTCCGC TCAGTTTGAA
GAAATGCAAC TACGTAGTCA TGTATGGGGC AATATCAAAT TAGATCCTTC CGAGCTGATT
GACCGTAAAG CACTGCGTTT TATGGGTGAT GCTGCGGCAT ATGCTTACAT TGCTATGCAA
GAAGCCATTA AGGATGCTCA GTTAACTGAA GAACAATATT CAAATCCTCG CGTAGGGTTG
ATTGTCGGCA CAGGCGGCGC TTCGTCTTCT AACCAAGTGC AAGCGGCAGA TATTTTGCGC
GAAAAGGGTG TAAAACGTGT TGGTCCTTAT ATTGTGCCTC GTATTATGGC AAGTACCGCA
AGCGCCTGTT TAGCCACTCC ATTCAAAATT AAAGGCATGA ACTACTCAAT CAGTTCAGCC
TGTGCGACCA GTGCTCACTG TATTGGCCAT GCTGTAGAAC TTATCCAAAT GGGTAAGCAA
GATATGGTAT TTGCTGGTGG TGCAGAAGAG CTCGATTGGA CCCTGACCAT GGGCTTCGAT
GCGATGGGCG CCCTATCGAC TAAATACAAT GCCACTCCAG ACAAAGCCTC TCGTACCTAT
GATGCCGACC GTGATGGTTT TGTGATCTCT GGCGGTGGCG GTATCTTAAT CGTTGAAGAG
TTAGAGCATG CGCTGGCTCG CGGCGCGAAG ATTTACGCCG AAGTGATTGG TTATGGCGCA
TCGTCAGATG GTTATGACAT GGTCGCTCCC TCTGGCGAAG GCGCTGTGCG TTGTATGCGA
CTTGCATTGG CCGATGTGGA TACCCCCATT GACTACATTA ATACCCACGG TACTTCGACG
CCAGTCGGTG ACGTGCGTGA GTTAGAAGCG CTGCGTGAAG TCTTTAAAGA CAAATGCCCA
CCAGTTGCAT CGACCAAATC GATGACAGGT CATGCCTTAG GCGCTGCTGG CGTACATGAA
GCCATTTATA GCTTAATCAT GATGGAAAAC AGCTTCATCG CTCCAAGCAT TAACATCGAT
AACCTAGATG AAGCCGCGAA AGACATGCCA ATCGTGCGTG AATACCGTGA TGCCGAACTA
AATACTGTTA TGAGCAACAG CTTTGGTTTT GGTGGTACTA ACGCAACACT CGTCATGCGT
AAATATAAGT AA
 
Protein sequence
MKRVVITGMG VVSSIGNNKQ EVTESLKAGR SGITHSAQFE EMQLRSHVWG NIKLDPSELI 
DRKALRFMGD AAAYAYIAMQ EAIKDAQLTE EQYSNPRVGL IVGTGGASSS NQVQAADILR
EKGVKRVGPY IVPRIMASTA SACLATPFKI KGMNYSISSA CATSAHCIGH AVELIQMGKQ
DMVFAGGAEE LDWTLTMGFD AMGALSTKYN ATPDKASRTY DADRDGFVIS GGGGILIVEE
LEHALARGAK IYAEVIGYGA SSDGYDMVAP SGEGAVRCMR LALADVDTPI DYINTHGTST
PVGDVRELEA LREVFKDKCP PVASTKSMTG HALGAAGVHE AIYSLIMMEN SFIAPSINID
NLDEAAKDMP IVREYRDAEL NTVMSNSFGF GGTNATLVMR KYK