Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3072 |
Symbol | fabB |
ID | 1170758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3191404 |
End bp | 3192615 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637344876 |
Product | 3-oxoacyl-(acyl-carrier-protein) synthase I |
Protein accession | NP_718636 |
Protein GI | 24374593 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAG TCGTGATCAC CGGAATGGGT GTTGTTTCAA GTATCGGTAA TAACAAGCAA GAAGTGACAG AGTCACTTAA AGCGGGCCGT AGTGGTATTA CACATTCCGC TCAGTTTGAA GAAATGCAAC TACGTAGTCA TGTATGGGGC AATATCAAAT TAGATCCTTC CGAGCTGATT GACCGTAAAG CACTGCGTTT TATGGGTGAT GCTGCGGCAT ATGCTTACAT TGCTATGCAA GAAGCCATTA AGGATGCTCA GTTAACTGAA GAACAATATT CAAATCCTCG CGTAGGGTTG ATTGTCGGCA CAGGCGGCGC TTCGTCTTCT AACCAAGTGC AAGCGGCAGA TATTTTGCGC GAAAAGGGTG TAAAACGTGT TGGTCCTTAT ATTGTGCCTC GTATTATGGC AAGTACCGCA AGCGCCTGTT TAGCCACTCC ATTCAAAATT AAAGGCATGA ACTACTCAAT CAGTTCAGCC TGTGCGACCA GTGCTCACTG TATTGGCCAT GCTGTAGAAC TTATCCAAAT GGGTAAGCAA GATATGGTAT TTGCTGGTGG TGCAGAAGAG CTCGATTGGA CCCTGACCAT GGGCTTCGAT GCGATGGGCG CCCTATCGAC TAAATACAAT GCCACTCCAG ACAAAGCCTC TCGTACCTAT GATGCCGACC GTGATGGTTT TGTGATCTCT GGCGGTGGCG GTATCTTAAT CGTTGAAGAG TTAGAGCATG CGCTGGCTCG CGGCGCGAAG ATTTACGCCG AAGTGATTGG TTATGGCGCA TCGTCAGATG GTTATGACAT GGTCGCTCCC TCTGGCGAAG GCGCTGTGCG TTGTATGCGA CTTGCATTGG CCGATGTGGA TACCCCCATT GACTACATTA ATACCCACGG TACTTCGACG CCAGTCGGTG ACGTGCGTGA GTTAGAAGCG CTGCGTGAAG TCTTTAAAGA CAAATGCCCA CCAGTTGCAT CGACCAAATC GATGACAGGT CATGCCTTAG GCGCTGCTGG CGTACATGAA GCCATTTATA GCTTAATCAT GATGGAAAAC AGCTTCATCG CTCCAAGCAT TAACATCGAT AACCTAGATG AAGCCGCGAA AGACATGCCA ATCGTGCGTG AATACCGTGA TGCCGAACTA AATACTGTTA TGAGCAACAG CTTTGGTTTT GGTGGTACTA ACGCAACACT CGTCATGCGT AAATATAAGT AA
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Protein sequence | MKRVVITGMG VVSSIGNNKQ EVTESLKAGR SGITHSAQFE EMQLRSHVWG NIKLDPSELI DRKALRFMGD AAAYAYIAMQ EAIKDAQLTE EQYSNPRVGL IVGTGGASSS NQVQAADILR EKGVKRVGPY IVPRIMASTA SACLATPFKI KGMNYSISSA CATSAHCIGH AVELIQMGKQ DMVFAGGAEE LDWTLTMGFD AMGALSTKYN ATPDKASRTY DADRDGFVIS GGGGILIVEE LEHALARGAK IYAEVIGYGA SSDGYDMVAP SGEGAVRCMR LALADVDTPI DYINTHGTST PVGDVRELEA LREVFKDKCP PVASTKSMTG HALGAAGVHE AIYSLIMMEN SFIAPSINID NLDEAAKDMP IVREYRDAEL NTVMSNSFGF GGTNATLVMR KYK
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