Gene SO_3013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3013 
Symbol 
ID1170701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3124990 
End bp3126249 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content47% 
IMG OID637344823 
Productphage integrase family site specific recombinase 
Protein accessionNP_718581 
Protein GI24374538 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTTT CTGACTCATG GTTAAAAGCA AACCTGAATA AAGTCGCTGA TAAGCCTTAT 
GAGAAAGCAG ATCGTGACGG CCTGAGCGTG AGGGTTTCAG CTAAGGGCGC TATTACTTTT
CAAATGCGCT ACCGCTGGGC AAGCAATGCA GCTCGGGTTG ATATTGGGCC TTATCCTTTG
CTCTCGCTTA AAGAAGCCAG AGAACAGTGT GAAGCCTACC GCAAGTTGCT ACTGGATAAT
CAAGATCCGC GGGAATATAA ACGCGATAAA GCGGCAAAGG CCGTATCAAA CGAAGGCTCA
GTCGAGCAGG TTTTTAGGGC ATGGCATAAG TCACAGTTTA GTGATGGCCG TGCCAGTGTA
AAGGACAGCA CCGCGCATGA GTATTTGCGC GCACTGGAAA TTAACGTTTT CCCTGTACTT
GGTAAAAAGC AGGTTGACCA AGTAACCTTG CACCAATGGC TAGATTTGTT TGAGTCTATC
GCAGCCAAGA AGCCAACCAT TACGAATCTA ACGTTAACAG TGAGTCGCAG GGCGCTTAAA
TGGGCTGTTC GTCGGCGAAT TATTAGCACA AATGAGTTGA TGGGTATTGA GTCGAAAGAG
GACTTAAATA TCTCGCGCAA AAGCCGCAAA CGCACGCTTA GCGATGATGA ACTCAAGATT
ATTTTGCAAG CCATTGATAA CGCAAAACGG CAGCGCCTTG GTAACCGGAT TATGGTTTTC
ATGGCCTTAT TCTTTGGCTG TAGGATTGGT GAATTACGAT TGGCGCAGAA AGCGCATTTT
GATTTTACTA AGATGATCTG GACCGTGCCG GTTGAAAACC ACAAAACAGG GTACAAGATG
CAGCGGCCGC TACTGCGGCC GATCATCGAC GAGATAGTAC CATTGCTTGA GCTAGCATTT
TCACTTAGCC CTAACGAGCT AGTGTTTCCG ACAGAGAAAG GCGGGATATA TTCGCAGGCG
GCGACAACAC GCATGTCTAA CCCAATTAAT ACGTGGGCTA AGCTGAATGG TACGCCGTTA
AATGAGTGGT ATTTGCACGA TTTGCGCAGA ACGCAGCGCA CTAACATGAG TAAAATTACT
ACTACAGAAG TGGCAGAAAC CATGCTGGGG CATAAGCTGA GCGGGATTCA GTCGATTTAT
GATCACTACG ACTATTTAGA AGAACAAGCT AAGGCATATC GAATTTGGTG GCAGAAGCTG
CAGCGCCTCA AAGATCCCGC AGCCTACCAC AACGTAGTTG AACTTAAAGC CGCGCAGTAA
 
Protein sequence
MALSDSWLKA NLNKVADKPY EKADRDGLSV RVSAKGAITF QMRYRWASNA ARVDIGPYPL 
LSLKEAREQC EAYRKLLLDN QDPREYKRDK AAKAVSNEGS VEQVFRAWHK SQFSDGRASV
KDSTAHEYLR ALEINVFPVL GKKQVDQVTL HQWLDLFESI AAKKPTITNL TLTVSRRALK
WAVRRRIIST NELMGIESKE DLNISRKSRK RTLSDDELKI ILQAIDNAKR QRLGNRIMVF
MALFFGCRIG ELRLAQKAHF DFTKMIWTVP VENHKTGYKM QRPLLRPIID EIVPLLELAF
SLSPNELVFP TEKGGIYSQA ATTRMSNPIN TWAKLNGTPL NEWYLHDLRR TQRTNMSKIT
TTEVAETMLG HKLSGIQSIY DHYDYLEEQA KAYRIWWQKL QRLKDPAAYH NVVELKAAQ