Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3013 |
Symbol | |
ID | 1170701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3124990 |
End bp | 3126249 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637344823 |
Product | phage integrase family site specific recombinase |
Protein accession | NP_718581 |
Protein GI | 24374538 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCTTT CTGACTCATG GTTAAAAGCA AACCTGAATA AAGTCGCTGA TAAGCCTTAT GAGAAAGCAG ATCGTGACGG CCTGAGCGTG AGGGTTTCAG CTAAGGGCGC TATTACTTTT CAAATGCGCT ACCGCTGGGC AAGCAATGCA GCTCGGGTTG ATATTGGGCC TTATCCTTTG CTCTCGCTTA AAGAAGCCAG AGAACAGTGT GAAGCCTACC GCAAGTTGCT ACTGGATAAT CAAGATCCGC GGGAATATAA ACGCGATAAA GCGGCAAAGG CCGTATCAAA CGAAGGCTCA GTCGAGCAGG TTTTTAGGGC ATGGCATAAG TCACAGTTTA GTGATGGCCG TGCCAGTGTA AAGGACAGCA CCGCGCATGA GTATTTGCGC GCACTGGAAA TTAACGTTTT CCCTGTACTT GGTAAAAAGC AGGTTGACCA AGTAACCTTG CACCAATGGC TAGATTTGTT TGAGTCTATC GCAGCCAAGA AGCCAACCAT TACGAATCTA ACGTTAACAG TGAGTCGCAG GGCGCTTAAA TGGGCTGTTC GTCGGCGAAT TATTAGCACA AATGAGTTGA TGGGTATTGA GTCGAAAGAG GACTTAAATA TCTCGCGCAA AAGCCGCAAA CGCACGCTTA GCGATGATGA ACTCAAGATT ATTTTGCAAG CCATTGATAA CGCAAAACGG CAGCGCCTTG GTAACCGGAT TATGGTTTTC ATGGCCTTAT TCTTTGGCTG TAGGATTGGT GAATTACGAT TGGCGCAGAA AGCGCATTTT GATTTTACTA AGATGATCTG GACCGTGCCG GTTGAAAACC ACAAAACAGG GTACAAGATG CAGCGGCCGC TACTGCGGCC GATCATCGAC GAGATAGTAC CATTGCTTGA GCTAGCATTT TCACTTAGCC CTAACGAGCT AGTGTTTCCG ACAGAGAAAG GCGGGATATA TTCGCAGGCG GCGACAACAC GCATGTCTAA CCCAATTAAT ACGTGGGCTA AGCTGAATGG TACGCCGTTA AATGAGTGGT ATTTGCACGA TTTGCGCAGA ACGCAGCGCA CTAACATGAG TAAAATTACT ACTACAGAAG TGGCAGAAAC CATGCTGGGG CATAAGCTGA GCGGGATTCA GTCGATTTAT GATCACTACG ACTATTTAGA AGAACAAGCT AAGGCATATC GAATTTGGTG GCAGAAGCTG CAGCGCCTCA AAGATCCCGC AGCCTACCAC AACGTAGTTG AACTTAAAGC CGCGCAGTAA
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Protein sequence | MALSDSWLKA NLNKVADKPY EKADRDGLSV RVSAKGAITF QMRYRWASNA ARVDIGPYPL LSLKEAREQC EAYRKLLLDN QDPREYKRDK AAKAVSNEGS VEQVFRAWHK SQFSDGRASV KDSTAHEYLR ALEINVFPVL GKKQVDQVTL HQWLDLFESI AAKKPTITNL TLTVSRRALK WAVRRRIIST NELMGIESKE DLNISRKSRK RTLSDDELKI ILQAIDNAKR QRLGNRIMVF MALFFGCRIG ELRLAQKAHF DFTKMIWTVP VENHKTGYKM QRPLLRPIID EIVPLLELAF SLSPNELVFP TEKGGIYSQA ATTRMSNPIN TWAKLNGTPL NEWYLHDLRR TQRTNMSKIT TTEVAETMLG HKLSGIQSIY DHYDYLEEQA KAYRIWWQKL QRLKDPAAYH NVVELKAAQ
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