| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2978 |
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| Symbol | |
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| ID | 1170667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3106800 |
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| End bp | 3107999 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637344790 |
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| Product | prophage LambdaSo, site-specific recombinase phage integrase family protein |
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| Protein accession | NP_718547 |
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| Protein GI | 24374504 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATTG CCTGTATTGC CTTAAGTGAT GCCGCCATTA AACGGGCTGT TGCCGATGAA
TCGATTACCG AAATTAGGGA CCCGCGCTAT CCGCTAAGGT TGCGCCTTGG GAGTTCGCGC
AGTCGTGGCA GTTGGTATTT AGTTACCAAC AAAGATGGCA AGGCCAGTTG GGCTAAGGTG
GCTAACTGGC CGTTGGTGAG TGCTAAGGCG ATCATTGATG ACTTGCCCAC GTTGAGCATT
CAGCATCGGC AAGATCAAAG CGTGAAGGTG AACACCTGGT TAAGTTGTGG TGGCTTGCTT
AATTGGTATT TAACCAGGTC ACAGGCGGAT ACTAGCTTAT CGATTAAACG GCGCCGCAAT
ATCAAATGCA CCATTGTTAA GCACTTATTG CCGGTGCTGG GTGAGGTGAT GCTGAGTGAG
CTAAATCATC ATAAAGTCGA TGAACTATTA ATTTGGCCAC TGCAGGCACG TTATTCCATC
GGCAGCGTTC GCCAGTATTA CGCCGTGCTG CGTAAAGCCT TTAAGCAAGC CACTGTGCTT
AAGCTAATTA GTGATGATCC GTTGGCATCG TTAAGCTTTA CGGATTTTAT TGCTACGCCG
ATCGCAACTA AACCACCGCA GTTACAGGCA ACGGATTTGC CTAAGTTGCT AAGTGACCTT
GATACGGCCA GTGATAGCGC GGCGTTGTTG GTGTTTATTA TGCTGGCCTA CGGTACCCGC
ATTGGCGAAA CCCGCTTGCT TAAGTGGAGC TATTACGATG AACCCAATGC CAAGTTGGTG
ATCCCCGCAA ATATCACCAA AACCCAAGCT CAACTGACTA TCCCTATCTC TGGACTGATG
GCCGATATAT TGCGCTGGCA TAAGTCAATG CAAGCCGCTG CAGGTTATCG AGGCGGGTAC
CTATTTCCGC ACCCATGCCG TAACACCGGA CTAGATGAAC GTGGTGCCAA TAGTTTGGTT
AAACAGGTGA GTGGTGGTGA ATGGACGGCC CATGATTTAC GCAAGTTGGC TCGCTCATGT
TGGGCTGATT TGGGTATCGA TTATATGGTA GCCGAGCAGA TGCTAAACCA CTCTATGACC
AAGCTAGACC AAGCCTATAT TCACACCTAT TTGGCTGATC AAAAGCGAGA GGCTATCGAG
CTTTGGCATA AGCATTTGCT ATCGATACAT CACCTATTTG CAGAGAGGAT TTGCAAATGA
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| Protein sequence | MAIACIALSD AAIKRAVADE SITEIRDPRY PLRLRLGSSR SRGSWYLVTN KDGKASWAKV
ANWPLVSAKA IIDDLPTLSI QHRQDQSVKV NTWLSCGGLL NWYLTRSQAD TSLSIKRRRN
IKCTIVKHLL PVLGEVMLSE LNHHKVDELL IWPLQARYSI GSVRQYYAVL RKAFKQATVL
KLISDDPLAS LSFTDFIATP IATKPPQLQA TDLPKLLSDL DTASDSAALL VFIMLAYGTR
IGETRLLKWS YYDEPNAKLV IPANITKTQA QLTIPISGLM ADILRWHKSM QAAAGYRGGY
LFPHPCRNTG LDERGANSLV KQVSGGEWTA HDLRKLARSC WADLGIDYMV AEQMLNHSMT
KLDQAYIHTY LADQKREAIE LWHKHLLSIH HLFAERICK
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