Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2965 |
Symbol | |
ID | 1170653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3098819 |
End bp | 3100117 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637344776 |
Product | prophage LambdaSo, HK97 family portal protein |
Protein accession | NP_718534 |
Protein GI | 24374491 |
COG category | [S] Function unknown |
COG ID | [COG4695] Phage-related protein |
TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAACAAA AAAACTCACT TGCTTTGGTT ATTGCTAAAG CAGCAAGTCA GCCGTTTGCG TCACTCGACA GCTTTATGGG TAAAACCTTA AGGCTAACAG ACGGTGATTT TTGGTCGCAA TTGATGGCAA CGTCTAAAAG CGGAAAAACA GTCAATGTGA ATACTGCTAT GCAGCTTGCT GCAGTATGGG CCTGTGTACG CCGCATTTCA GAAACTGTTG CAATGCTGCC GCTAGGCTTG TACGAGCGCC AAAGTGATGG TGGCCGGATC CAAGTTCAAA ACAGTCTTTC TACTGTATTA AGCATTAAGC CCAATGCAGA TATGACTGCC ATGCAGTTTT GGGAGGCAGT ACTCGCATCA TTGCTACTTA AAGGAAATGC GTTTATTGAA ATCCACCGCT CTGGCGGCGA GATTATCGCC CTCGATTTTC TTATGCCGCA CCGCATGGAT ATCGACTTGG ATGATAGCGG TAGCTTGATC TACTGGTACA CGCCAAGAAA CGGATCGCGC CGTCAAATCA AAAAGCAAAA CATGATGCAC ATTCCTGCAT TCTCGTTAGA TGGGTTGATT GGTTTATCCA CCATCTCTTA CGGTGCCAAT GTGTTTGGTG GTGCCATGTC TGCCGAGGAT GTGAGCGCAA GTACCTTTAA AAACGGCATG ACAAAAACGG TCGCTTTTAA AGTTGATCGC GTAATGAATA AAGAGCAACG CGCAGAATTT CGTGAGTATG TAAAAACGAT TACTGGCGCA ATGAATGCTG GAAAATCACC CGTACTTGAA CAAGGCATCA CCCCTGAGTT AATCGGCATT AACCCAATTG ATGCCCAGTT ACTCGAGTCA CGAAACTACA GCGTAGAAGA GATTTGCCGC TGGTTTTTGG TGGACCCGTC ACTCATAGGA TTTGGCGGTA AAGACAGCAA TTGGGGCACT GGACTCGAGC AAAAGATGAT CGGCTTTGTC ACCTTAACCT TATCGTCTTG GATCCGCCGT ATCGAGCAAT CAATCTCTAT TAATCTGCTC ACGCCAGCAC AACGGCAAAC CCAATACGCA CAATATAACC TTGAGGCATT ACTGCGGGGC GATAGCGCCT CACGCGCCGA GTTCTACAGC AAAATGACTC AAAACGGCAT CTACACCCGT GATGATTGCC GGGTTAAAGA AAACTTACCG CGCCGCGGTG GTAATGCCGA TGTCTTAACC GTTCAAACCA ACTTAGCCCC CATTGATCAG CTGGGTGCTC AATCAGAATC TGCAAAAGTC CAAGCCGCAC TAAACAACTG GCTCAATCAA GATAACTAG
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Protein sequence | MKQKNSLALV IAKAASQPFA SLDSFMGKTL RLTDGDFWSQ LMATSKSGKT VNVNTAMQLA AVWACVRRIS ETVAMLPLGL YERQSDGGRI QVQNSLSTVL SIKPNADMTA MQFWEAVLAS LLLKGNAFIE IHRSGGEIIA LDFLMPHRMD IDLDDSGSLI YWYTPRNGSR RQIKKQNMMH IPAFSLDGLI GLSTISYGAN VFGGAMSAED VSASTFKNGM TKTVAFKVDR VMNKEQRAEF REYVKTITGA MNAGKSPVLE QGITPELIGI NPIDAQLLES RNYSVEEICR WFLVDPSLIG FGGKDSNWGT GLEQKMIGFV TLTLSSWIRR IEQSISINLL TPAQRQTQYA QYNLEALLRG DSASRAEFYS KMTQNGIYTR DDCRVKENLP RRGGNADVLT VQTNLAPIDQ LGAQSESAKV QAALNNWLNQ DN
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