| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2933 |
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| Symbol | |
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| ID | 1170621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3067935 |
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| End bp | 3068951 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637344745 |
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| Product | putative periplasmic protease |
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| Protein accession | NP_718503 |
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| Protein GI | 229220628 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAATTTC TATACGAATA TGGCATGTTT TTAGCGAAAG CCGTGACGAT CGTTGTGGCG
ATTGTTGCAG TGATTATTGT GGTCTTGGCG TCCACAGTAA AACACAAATC GGATAAGGGT
GAGTTAAGGA TCACCAATTT TTCTGAAGAA TTGGAAGAGC TAAAGCATAG CTTGAAGGAA
GAACTGTTGA CTAAAAAGCA GTTTAAAGCC TATGAAAAGC AACTCAAAGC AGAAGAGAAG
GCGAAGGAAA AGGCAGACGA GGGAGAGAGC AAAGGAAAGG TTTTTGTTGT TGATTTTAAA
GGCAGTATTG ATGCCGCTGA GGTTGCCTCA CTGCGTGAGG AAATTAGCGC AATTTTAACC
ATTGCTGAAA AGGGCGACGA AGTTGTCGTT AATGTCGAGA GTGGTGGCGG AATGGTGCAT
GGCTATGGTC TTGCGTCGAG CCAGCTTGAC CGTTTACGTC AGGCTGATAT TCCTTTAACG
GTTTGCGTGG ATAAAGTTGC TGCCAGCGGT GGTTACATGA TGGCCTGTGT GGCCAATAAA
GTGTATGCCG CGCCATTTGC TATAGTTGGT TCTATCGGTG TTGTTGCCCA GTTACCTAAC
TTCAACCGTT TATTGAAAAA ACACGAAATC GATTATGAGC AACATACTGC AGGTGACTTT
AAACGCACTT TGACCGTATT TGGTGAAAAC ACTGACGAGG GCAGACAGAA GTTTCAACAG
GAGCTGGAAG AAACCCATGT GCTGTTTAAA GCTTTTGTGA GTAAGTATCG CCCTCAACTC
GATTTGGCTA AGGTGGCCAC GGGTGAGCAT TGGTATGGTC AACAGGCGAT TGAACTGGGC
CTTATCGATG CGATTTCAAC CAGTGATGAT GTGTTAATGC ATTTAGCTGG CGAACGTACC
GTGTATAAGC TGCGTTACCA GGTGCGCAAA AAACTAGCTG ATAAAATCGC CCATGGTGCT
TCGCTTTCTG TTAATGCCAT TTTTAATCGT CTGGTAGAGA AAAATCGTCC TGTGTAG
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| Protein sequence | MEFLYEYGMF LAKAVTIVVA IVAVIIVVLA STVKHKSDKG ELRITNFSEE LEELKHSLKE
ELLTKKQFKA YEKQLKAEEK AKEKADEGES KGKVFVVDFK GSIDAAEVAS LREEISAILT
IAEKGDEVVV NVESGGGMVH GYGLASSQLD RLRQADIPLT VCVDKVAASG GYMMACVANK
VYAAPFAIVG SIGVVAQLPN FNRLLKKHEI DYEQHTAGDF KRTLTVFGEN TDEGRQKFQQ
ELEETHVLFK AFVSKYRPQL DLAKVATGEH WYGQQAIELG LIDAISTSDD VLMHLAGERT
VYKLRYQVRK KLADKIAHGA SLSVNAIFNR LVEKNRPV
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