Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2847 |
Symbol | |
ID | 1170542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 2966142 |
End bp | 2967035 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637344663 |
Product | LysR family transcriptional regulator |
Protein accession | NP_718419 |
Protein GI | 24374376 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTACTA GCTTGCCACC GCTCAATGCA TTACGGGCAT TCGAGTCAGC CGCCCGCTTA CAGAGTATAA CGCTGGCGAG TAAAGAACTG CACGTCACCC ATGGCGCCAT CAGTAAACAA ATCAGGGTAT TAGAAGATTT TTTAGGTTTC GCCCTCTTTG TTAGGCTCCA TAAAAAAGTC GAACTCACTG ACGAAGCCAA GCGTTACTTT CCCCATGTAC AAGCGGCTCT GCAAACCCTG TCGAGCGCAA CCGCCGATTT GCGTAGCCAA GGTTCCCGGC CACAAACCTT AGCCATCAAT GTATTACCAA GTTTAACCAT TAACTGGTTA ATCCCTCGTA TGGAGCAATT TAAGTCGCGT TATCCACATC TATATGTGGA TCTCTCGATA GGTGACTTTG CCGTTGACTT CAGCCAAGGG CGCTACGACA TCGCGATCCG CAGTAGTACC AAGCTTCCTA AGGGAGTCAA TTACATCAAA CTCATGGATG AAGATCTGTG CTTAGTTTGC GCGCCGTCAT TAGCCCCAAA ACTGCAATGT ATTGAGGATA TTAATCATGT CACCTTACTC AAACACACCA CTCGACCAGA ACTTTGGGAT TATTGGGCTG AAAAGGTAGG GTTAGTGCTC ACACAAGAGC AAACATTCGG CGTTGAGCAT TTTTATATGT TAAGTCAGGC GGCTGCAAGT GGCATGGGCG CGGCGCTGAT CCCACGCTTT TTTATTGAAG AACAATTAGC TAACGGCAGT TTAGTCATCC CCTTTCATTC AACGTTTACC AGCCCATATG TTTATTACCT ACTCACGCCT AAATCCCCAA GCTTGCCGTT AAAAGTGCAA GCATTTATCG AGTGGATGCT CGACCTCTTC GCTCCTTATC GCAATGCATG CTAA
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Protein sequence | MFTSLPPLNA LRAFESAARL QSITLASKEL HVTHGAISKQ IRVLEDFLGF ALFVRLHKKV ELTDEAKRYF PHVQAALQTL SSATADLRSQ GSRPQTLAIN VLPSLTINWL IPRMEQFKSR YPHLYVDLSI GDFAVDFSQG RYDIAIRSST KLPKGVNYIK LMDEDLCLVC APSLAPKLQC IEDINHVTLL KHTTRPELWD YWAEKVGLVL TQEQTFGVEH FYMLSQAAAS GMGAALIPRF FIEEQLANGS LVIPFHSTFT SPYVYYLLTP KSPSLPLKVQ AFIEWMLDLF APYRNAC
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