Gene SO_2847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2847 
Symbol 
ID1170542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2966142 
End bp2967035 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content47% 
IMG OID637344663 
ProductLysR family transcriptional regulator 
Protein accessionNP_718419 
Protein GI24374376 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTACTA GCTTGCCACC GCTCAATGCA TTACGGGCAT TCGAGTCAGC CGCCCGCTTA 
CAGAGTATAA CGCTGGCGAG TAAAGAACTG CACGTCACCC ATGGCGCCAT CAGTAAACAA
ATCAGGGTAT TAGAAGATTT TTTAGGTTTC GCCCTCTTTG TTAGGCTCCA TAAAAAAGTC
GAACTCACTG ACGAAGCCAA GCGTTACTTT CCCCATGTAC AAGCGGCTCT GCAAACCCTG
TCGAGCGCAA CCGCCGATTT GCGTAGCCAA GGTTCCCGGC CACAAACCTT AGCCATCAAT
GTATTACCAA GTTTAACCAT TAACTGGTTA ATCCCTCGTA TGGAGCAATT TAAGTCGCGT
TATCCACATC TATATGTGGA TCTCTCGATA GGTGACTTTG CCGTTGACTT CAGCCAAGGG
CGCTACGACA TCGCGATCCG CAGTAGTACC AAGCTTCCTA AGGGAGTCAA TTACATCAAA
CTCATGGATG AAGATCTGTG CTTAGTTTGC GCGCCGTCAT TAGCCCCAAA ACTGCAATGT
ATTGAGGATA TTAATCATGT CACCTTACTC AAACACACCA CTCGACCAGA ACTTTGGGAT
TATTGGGCTG AAAAGGTAGG GTTAGTGCTC ACACAAGAGC AAACATTCGG CGTTGAGCAT
TTTTATATGT TAAGTCAGGC GGCTGCAAGT GGCATGGGCG CGGCGCTGAT CCCACGCTTT
TTTATTGAAG AACAATTAGC TAACGGCAGT TTAGTCATCC CCTTTCATTC AACGTTTACC
AGCCCATATG TTTATTACCT ACTCACGCCT AAATCCCCAA GCTTGCCGTT AAAAGTGCAA
GCATTTATCG AGTGGATGCT CGACCTCTTC GCTCCTTATC GCAATGCATG CTAA
 
Protein sequence
MFTSLPPLNA LRAFESAARL QSITLASKEL HVTHGAISKQ IRVLEDFLGF ALFVRLHKKV 
ELTDEAKRYF PHVQAALQTL SSATADLRSQ GSRPQTLAIN VLPSLTINWL IPRMEQFKSR
YPHLYVDLSI GDFAVDFSQG RYDIAIRSST KLPKGVNYIK LMDEDLCLVC APSLAPKLQC
IEDINHVTLL KHTTRPELWD YWAEKVGLVL TQEQTFGVEH FYMLSQAAAS GMGAALIPRF
FIEEQLANGS LVIPFHSTFT SPYVYYLLTP KSPSLPLKVQ AFIEWMLDLF APYRNAC