| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2843 |
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| Symbol | |
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| ID | 1170539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2960659 |
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| End bp | 2963715 |
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| Gene Length | 3057 bp |
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| Protein Length | 1018 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637344660 |
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| Product | exonuclease SbcC, putative |
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| Protein accession | NP_718415 |
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| Protein GI | 24374372 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCAC TACAACTTTC CATGTCGGCT TTTGGCCCGT TTGCTTCGAC TCAGACAATT
GATTTTACTG AACTTGGTGA TAATCCGTTA TTTTTGATCA ACGGGCCAAC TGGCGCGGGT
AAAACGACTC TGCTCGATGG TATCAGCTTT GCGTTGTATG GAAAAACCAC CGGCAATGAA
CGTGAAGGCA GCCAAATGCG TTGCGATATG GCCGATGACA ATCTGCTTAC TGAGGTGACC
TTTAGTTTTA AATTGGGTAA CACCGCGTAT CGTATTCGCC GAGTGCCCGA GCAGGACAGA
CTCAAAAAGA ATGGCGAGGG TTCGACAGTC CAAAAGAGCG AGGCGCAGCT GTTTAAGATC
GCTCCCGATG GTACTGAAAC CCTATTAGTC GCTAGTAAAG TATCAGAGGC AACGGCTGAA
ATTGAAGCGT TAACGGGCTT AGACGTAGAA CAATTTCGTC AGGTTATGGT GCTGCCGCAG
GGGAAGTTTC GTGAATTACT CATGGCTGAC TCCAAGGCGC GTGAGCAAAT TTTTAGTCAA
TTATTTCAAA CCCATATCTA TAAACGTATT GAAGATATCT TAAAGGCGAA GGCGGCCGAC
ATCCGCGCCT TGGTAAAAGA GCAGCGTGCG CGTCGCGATG GCATTTTACA AACCGCTGAG
CTAGCGAGTG ACGACGAACT TGCCGCCGAG TTTAGTCGAA TAGAACCCGA ATTGGCGGCT
GCTATAGTCG CGAAAGAACG TAGCACGGCG GCGCATCTAC AGGCGTTAAA ACAGCATGAC
AGTGCGCAGC AACGTTTTGC TGAATTTACC CGTTTAAGTG AATTGGAATC CCAAGCCACT
TTGCTTCATG AACAGCAAGC TGATATTGCA GCGCAAACGG CTCGCCTGAA TGTGGCAAAG
CAAGCGCAGC GTCTAAAGCC CTTATTGGAT AATGCGTTAT CGAGGGAGCA GGAAGCGACG
ATTGCTAATG ATCAGCGCAG CCGCGCCCAA ATGGTACTCG ATGCGGCAAA GCTTGCGCTT
GCCAAAGCTG AAACCGAAGC GCAAGAGCTT AACGGCCTAG AACCGCGCTT ACGAACTCAG
GAGCAACTGG CTAACAGCTT AACGTCACTA GCACCGCAAT TGGCTGAGTT TGCCGATGTA
GAGCAAGCAT TGGCTAAGGC AAACATCTTA TTGCAACAAA CCAAAGTGCA GGGGCAAGAG
ACTAAGACGG CGCTTGCAAG CTTAGTTGAG CAGCGCAGCA CCTATGAAAA TCAATTGCCA
GCATTACAAC AGCAAAGTGA GCGTCAACTC GCGACTGCAC AAGCCTTGCA GCAACAGCGC
CACTTACTTG AGTTGTTCAA ACAATGGCAA CAAATCTGCG TCAAAGTCGC CCAAACTGAA
GAGGCGCTTG TACTGGCAGG ATTACAAGGA AAGACGCTGA ACGCGCAGCA TCAGGCAGCG
CTAAGTGACT ATAAGTCTTT ACAGCTCAGT TGGTTTCAAG GCCAAGCGGC CATTTTAGCG
AGGGAGCTCA AACTCGAAGA ACCCTGCCCA GTTTGCGGCA GTATCGAGCA TCCTCATCCT
GCAACCAGTC ATGATAATTT ACCAACGGAC GCACAGCTAC AAGCTGCGCA GAATGCCGAG
GTCAATGCAC TCGAACAACT CAGCAAAGCG AGGGCGGAGT ATCGGGGGTT ACAAAAACAG
TTAGAAGCAC AGCAATTGCA GGCAAATGAA CTGGCCTCCT CGCTGGGAGA TGCGGTTGAG
CTACCACTCG AATCGCATAT CCAACAGCTC GAGGAATTAA CACGCCACGC AAAACAAGCG
GAAGTGGCCA CCCAAGCATT GCAGCAGTTA CAGCAGCAAA TCAAAGCGTT GCAGCAGCAA
GAGTTAGGAT TGACGCAACA ATTAGAGCTT GAGCGTGAGC GGTATCATCA ACAAGAAGGC
GAAGTGGCGC GTTTATCTGG CCAATTAGCG GAAAAGGCGC TTCGGATCCC TGACGAATAC
CGCTCGCTTA CTGCGTTAAA TCAAGCGATT AATGATAATC AGCAGCAGCT TGAGAAGACT
CGTGGGCTAA TTCATGCCCT TAGAACCGCA CAGCAGCAGG CATCCGAGCA TTGTGTGGCA
GCGCAAACGG CGCTAGAGGC TGCGATACAA CGCTGTCATA GCGCAGATGA GCTGCAGGCT
CTGGCTTTGG GCGACCTTAA CTCACAACTG CATTTAGCGG GTTTTACTGA TAGGGACGCA
TTAGGGGCTG CATTGTTAGC CGATGAGCAA ATGCAAGCGC TGGGCGAGCG TATTGAAACC
TATCAGCGTC AGTGCGCCCT AAATCAGTCA CAGCTTGCTC AGCTAAAAAC TCAGCTTAGT
GATGTCAGCG TGCCCGATCT CGATGCCCTA GAAGCTATGC TCGCAGAAAA GCGTCAACAA
CTTAACATCG CGGAAGTGGC ATGGAGCCAA CTCAATACTC GGTTCTCTTT GCTTAAACAA
ACTCAAACAC AGCTCAGTAT CGTCGATCAA AAAGCGAAAG CCCTTGAGGA TGAATACGCC
ATTATTGGCA CCTTGGCCGA TGTGGCCAAT GGGAATACCG GCAACAAGAT TTCCCTGCAA
CGTTTTGTAT TAAGTGTCTT ACTCGATGAT GTATTACTCG CCGCGACGCA GAGATTACAC
CTGATGAGTA AAGGTCGATA TCGATTACTA CGCAAAGAAG ACAGAGCAAA GGGAAATAAG
GCATCAGGGC TTGAACTTGA AGTCGAAGAC GCTTACACCG CAAAAGTGCG CCCTGTGGCG
ACCTTAAGTG GAGGGGAGAG TTTTATGGCA GCCTTATCCA TGGCACTGGG TTTATCAGAC
GTGGTGCAAG CTTACGCGGG GGGCATAAAA CTCGATACGT TATTTATCGA CGAAGGTTTT
GGCAGCCTAG ATCAGGACTC CCTCGAGCTG GCAATTCGCA CCTTAATGGA TTTGCAATCC
GCAGGAAGGA TGATCGGCGT GATATCTCAT GTTTCTGAGA TGAAAGAGCA GATAAATACC
CGAATTGATC TCTTGAAAAC TTCCCATGGG AGTGAAATCA AAGTGATTTT GCCTTAG
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| Protein sequence | MKPLQLSMSA FGPFASTQTI DFTELGDNPL FLINGPTGAG KTTLLDGISF ALYGKTTGNE
REGSQMRCDM ADDNLLTEVT FSFKLGNTAY RIRRVPEQDR LKKNGEGSTV QKSEAQLFKI
APDGTETLLV ASKVSEATAE IEALTGLDVE QFRQVMVLPQ GKFRELLMAD SKAREQIFSQ
LFQTHIYKRI EDILKAKAAD IRALVKEQRA RRDGILQTAE LASDDELAAE FSRIEPELAA
AIVAKERSTA AHLQALKQHD SAQQRFAEFT RLSELESQAT LLHEQQADIA AQTARLNVAK
QAQRLKPLLD NALSREQEAT IANDQRSRAQ MVLDAAKLAL AKAETEAQEL NGLEPRLRTQ
EQLANSLTSL APQLAEFADV EQALAKANIL LQQTKVQGQE TKTALASLVE QRSTYENQLP
ALQQQSERQL ATAQALQQQR HLLELFKQWQ QICVKVAQTE EALVLAGLQG KTLNAQHQAA
LSDYKSLQLS WFQGQAAILA RELKLEEPCP VCGSIEHPHP ATSHDNLPTD AQLQAAQNAE
VNALEQLSKA RAEYRGLQKQ LEAQQLQANE LASSLGDAVE LPLESHIQQL EELTRHAKQA
EVATQALQQL QQQIKALQQQ ELGLTQQLEL ERERYHQQEG EVARLSGQLA EKALRIPDEY
RSLTALNQAI NDNQQQLEKT RGLIHALRTA QQQASEHCVA AQTALEAAIQ RCHSADELQA
LALGDLNSQL HLAGFTDRDA LGAALLADEQ MQALGERIET YQRQCALNQS QLAQLKTQLS
DVSVPDLDAL EAMLAEKRQQ LNIAEVAWSQ LNTRFSLLKQ TQTQLSIVDQ KAKALEDEYA
IIGTLADVAN GNTGNKISLQ RFVLSVLLDD VLLAATQRLH LMSKGRYRLL RKEDRAKGNK
ASGLELEVED AYTAKVRPVA TLSGGESFMA ALSMALGLSD VVQAYAGGIK LDTLFIDEGF
GSLDQDSLEL AIRTLMDLQS AGRMIGVISH VSEMKEQINT RIDLLKTSHG SEIKVILP
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